Q7VHM6 (Q7VHM6_HELHP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Signal recognition particle protein EMBL AAP77537.1

Gene names

Name:	ffh EMBL AAP77537.1
Ordered Locus Names:	HH_0940

Organism

Helicobacter hepaticus (strain ATCC 51449 / 3B1) [Complete proteome] [HAMAP]

Taxonomic identifier

235279 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	447 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	SRP-dependent cotranslational protein targeting to membrane Inferred from electronic annotation. Source: InterPro
Cellular component	signal recognition particle Inferred from electronic annotation. Source: InterPro
Molecular function	7S RNA binding Inferred from electronic annotation. Source: InterPro GTP binding Inferred from electronic annotation. Source: InterPro nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7VHM6 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: C541DB2173B7B7B4	FASTA	447	48,894
	10 20 30 40 50 60 MFNTLTSSFK GIINKIRFSD DEKSLQRACD ELKKTLLKND VYHKAVKQII QEVQQRTKEA 70 80 90 100 110 120 GIGKQNFINA LQDALSKILQ SSKSYGISFS PTPPSVIIMM GLQGSGKTTS SAKLALYFKQ 130 140 150 160 170 180 KGKKVLLVAC DLHRLAAIEQ LTQLAQSIEV DIFTPSHSSQ PNNAVYVAKE AKQKAIEAHY 190 200 210 220 230 240 DIVIIDSAGR LAIDEVLMSE LEEIKRAVSA SECLYVADSL SGQDGIRSAQ HFDDKIGIDG 250 260 270 280 290 300 VILSKFDSDT KGGIALSIAY QIGIPLKFIG SGEKIADFDI FIPDRIISRL MGAGDIASLA 310 320 330 340 350 360 EKTANVINQE EAKTIAKKIK KGQFGFEDFI AQIENVKKLG SMSSIASMIP GLGGMANALK 370 380 390 400 410 420 DVDLDKSGEI KNIRAMVNSM TKKERENPDL LNGSRRKRIA QGSGLEVSDI NRIIKQFDQA 430 440 AKFAKKLSQK GGMQELMSMM GNLRIPK

References

[1]

"The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus." Suerbaum S., Josenhans C., Sterzenbach T., Drescher B., Brandt P., Bell M., Droege M., Fartmann B., Fischer H.-P., Ge Z., Hoerster A., Holland R., Klein K., Koenig J., Macko L., Mendz G.L., Nyakatura G., Schauer D.B. , Shen Z., Weber J., Frosch M., Fox J.G. Proc. Natl. Acad. Sci. U.S.A. 100:7901-7906(2003) [PubMed: 12810954] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51449 / 3B1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017125 Genomic DNA. Translation: AAP77537.1.
RefSeq	NP_860471.1. NC_004917.1.
3D structure databases
HSSP	HSSP built from PDB template 1HQ1 based on UniProtKB P07019.
ProteinModelPortal	Q7VHM6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1492629.
GenomeReviews	Gene locus HH_0940 in contig AE017125_GR.
KEGG	hhe:HH0940.
NMPDR	fig|235279.1.peg.940.
PATRIC	20589340. VBIHelHep90276_0937.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG562580.
OMA	NVEIGIT.
ProtClustDB	PRK10867.
Family and domain databases
InterPro	IPR003593. ATPase_AAA+_core. IPR000897. Signal_recog_part_SRP54_GTPase. IPR013822. Signal_recog_particl_SRP54_hlx. IPR004780. Signal_recog_particle_SRP. IPR004125. Signal_recog_particle_SRP54_M. [Graphical view]
Gene3D	G3DSA:1.20.120.140. SRP54_helical. 1 hit. G3DSA:1.10.260.30. SRP54_M. 1 hit.
KO	K03106.
PANTHER	PTHR11564:SF7. SRP_sub. 1 hit.
Pfam	PF00448. SRP54. 1 hit. PF02881. SRP54_N. 1 hit. PF02978. SRP_SPB. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. SM00962. SRP54. 1 hit. SM00963. SRP54_N. 1 hit. [Graphical view]
SUPFAM	SSF47446. Signal_recog_particle_SRP54_M. 1 hit. SSF47364. SRP54. 1 hit.
TIGRFAMs	TIGR00959. Ffh. 1 hit.
PROSITE	PS00300. SRP54. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7VHM6_HELHP

Accession

Primary (citable) accession number: Q7VHM6

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	December 14, 2011
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)