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Protein

Superoxide dismutase

Gene

sodF

Organism
Helicobacter hepaticus (strain ATCC 51449 / 3B1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciHHEP235279:GHUA-1873-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodFImported
Ordered Locus Names:HH_1832Imported
OrganismiHelicobacter hepaticus (strain ATCC 51449 / 3B1)Imported
Taxonomic identifieri235279 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000002495 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi235279.HH1832.

Structurei

3D structure databases

ProteinModelPortaliQ7VF46.
SMRiQ7VF46. Positions 2-191.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.
OMAiDSLINWD.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7VF46-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFELRKLPYG KNEFNGFISE QTFEYHYGKH HQTYVNNLNN LIKGTEFENA
60 70 80 90 100
ELGDIILKSS GGIFNNAAQV YNHDFYWDCL SPKESALSAE LSAAINAEFG
110 120 130 140 150
SLDVFKEKFL ASSTTLFGSG WNWLVYNTQS KKLEIVQTSN AATPATDSKV
160 170 180 190 200
PLLVVDVWEH AYYIDHRNAR PAYLEAFWKH INWAFVSRAY EWALKEGLQS
210
FKFYINGIHK K
Length:211
Mass (Da):24,284
Last modified:October 1, 2003 - v1
Checksum:i2281DB287F1AF50C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017125 Genomic DNA. Translation: AAP78429.1.
RefSeqiWP_011116671.1. NC_004917.1.

Genome annotation databases

EnsemblBacteriaiAAP78429; AAP78429; HH_1832.
KEGGihhe:HH1832.
PATRICi20591100. VBIHelHep90276_1807.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017125 Genomic DNA. Translation: AAP78429.1.
RefSeqiWP_011116671.1. NC_004917.1.

3D structure databases

ProteinModelPortaliQ7VF46.
SMRiQ7VF46. Positions 2-191.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi235279.HH1832.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAP78429; AAP78429; HH_1832.
KEGGihhe:HH1832.
PATRICi20591100. VBIHelHep90276_1807.

Phylogenomic databases

KOiK04564.
OMAiDSLINWD.
OrthoDBiEOG63NMNT.

Enzyme and pathway databases

BioCyciHHEP235279:GHUA-1873-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51449 / 3B1Imported.

Entry informationi

Entry nameiQ7VF46_HELHP
AccessioniPrimary (citable) accession number: Q7VF46
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: July 22, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.