Q7VDI5 (Q7VDI5_PROMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted enzyme with a TIM-barrel fold EMBL AAP99437.1

Gene names

Ordered Locus Names:

Pro_0391

Organism

Prochlorococcus marinus (strain SARG / CCMP1375 / SS120)

Taxonomic identifier

167539 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length	207 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1
Sequence similarities	Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
Ligand	Pyridoxal phosphate PIRSR PIRSR004848-1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Modified residue	21	1	N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

	Sequence		Length	Mass (Da)
	Q7VDI5 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 14854FC3B97E9C6E	FASTA	207	23,320
	10 20 30 40 50 60 MHFKSFLNSL PNGVKLVAVS KGQSTSQIRS LASQGQVDFG ESRLQEALPK LNSLKDLKTV 70 80 90 100 110 120 RWHFIGSLQA NKVRQVVKAF DVIHSIDSLK LAKRISRISA EECKKPRVMA QVKFRNDPSK 130 140 150 160 170 180 FGFTPDGLLE VWNEFIALPN IDVIGLMTIS PKELDLNQRK ILFRECRVFS EKLGLKDCSM 190 200 GMSQDWKEAV EEGATWIRVG SLLFGGR

References

[1]

"Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome." Dufresne A., Salanoubat M., Partensky F., Artiguenave F., Axmann I.M., Barbe V., Duprat S., Galperin M.Y., Koonin E.V., Le Gall F., Makarova K.S., Ostrowski M., Oztas S., Robert C., Rogozin I.B., Scanlan D.J., Tandeau de Marsac N., Weissenbach J. , Wincker P., Wolf Y.I., Hess W.R. Proc. Natl. Acad. Sci. U.S.A. 100:10020-10025(2003) [PubMed: 12917486] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SARG / CCMP1375 / SS120.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE017126 Genomic DNA. Translation: AAP99437.1.
RefSeq	NP_874785.1. NC_005042.1.
3D structure databases
HSSP	HSSP built from PDB template 1B54 based on UniProtKB P38197.
ProteinModelPortal	Q7VDI5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1461773.
GenomeReviews	Gene locus Pro_0391 in contig AE017126_GR.
KEGG	pma:Pro0391.
PATRIC	23027397. VBIProMar8617_0399.
Phylogenomic databases
HOGENOM	HBG289671.
OMA	AVSKTFE.
ProtClustDB	CLSK919197.
Enzyme and pathway databases
BioCyc	PMAR167539:PRO_0391-MONOMER.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7VDI5_PROMA

Accession

Primary (citable) accession number: Q7VDI5

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)