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Q7VBP0 (GLGA_PROMA) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Pro_1052
OrganismProchlorococcus marinus (strain SARG / CCMP1375 / SS120) [Reference proteome] [HAMAP]
Taxonomic identifier167539 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus

Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 501501Glycogen synthase HAMAP-Rule MF_00484
PRO_0000188629

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7VBP0 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: DF1C02887C617B6F

FASTA50156,943
        10         20         30         40         50         60 
MRVLFAAAEC APMVKVGGMG DVVASLPSAL AKLGHDVRLI IPGYSKLWGL LDISKDPIYT 

        70         80         90        100        110        120 
AQTMGAEFSV YETKHPTSNL PIYLVGHPVF DPERIYGGED EDWRFTFFAS ATAEFAWNVW 

       130        140        150        160        170        180 
KPQVLHCHDW HTGMIPVWMH QDPEISTVFT IHNLKYQGPW RWKLERMTWC PWYMSGDHTM 

       190        200        210        220        230        240 
AAAMLFADRV NAVSPTYSRE IRTSEYGESL EGLLNYISGK LRGILNGIDL DEWDPATDKA 

       250        260        270        280        290        300 
LPANFSSGKM STRKKNKEAL QRQMGLEVNN DKYLLGMVGR LVDQKGVDLL LQVSRRLLAY 

       310        320        330        340        350        360 
TDSQIVVLGT GDQILESALW ELAIDHPGRF AVFLTYDDYL SRLIYAGSDA FLMPSRFEPC 

       370        380        390        400        410        420 
GISQLLAMRY GSIPIVRNVG GLVDTVIPHD PINKSGTGFC FDRFEPIDFY TALVRSWEAF 

       430        440        450        460        470        480 
RHRRSWKELQ KRAMTQMYSW ERSAMEYETM YKEVSGYKEP SPDAIEVEKF SVGQDADPSL 

       490        500 
KNEKLSVGQD EDSSLKNERF I 

« Hide

References

[1]"Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome."
Dufresne A., Salanoubat M., Partensky F., Artiguenave F., Axmann I.M., Barbe V., Duprat S., Galperin M.Y., Koonin E.V., Le Gall F., Makarova K.S., Ostrowski M., Oztas S., Robert C., Rogozin I.B., Scanlan D.J., Tandeau de Marsac N., Weissenbach J. expand/collapse author list , Wincker P., Wolf Y.I., Hess W.R.
Proc. Natl. Acad. Sci. U.S.A. 100:10020-10025(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SARG / CCMP1375 / SS120.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017126 Genomic DNA. Translation: AAQ00097.1.
RefSeqNP_875444.1. NC_005042.1.

3D structure databases

ProteinModelPortalQ7VBP0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING167539.Pro1052.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAQ00097; AAQ00097; Pro_1052.
GeneID1462434.
KEGGpma:Pro_1052.
PATRIC23028823. VBIProMar8617_1102.

Phylogenomic databases

eggNOGCOG0297.
KOK00703.
OMAPYHDESQ.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycPMAR167539:GJN2-1079-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_PROMA
AccessionPrimary (citable) accession number: Q7VBP0
Entry history
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: October 1, 2003
Last modified: May 14, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways