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Q7V8F0 (GLGA_PROMM) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:PMT_0403
OrganismProchlorococcus marinus (strain MIT 9313) [Complete proteome] [HAMAP]
Taxonomic identifier74547 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus

Protein attributes

Sequence length499 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 499499Glycogen synthase HAMAP-Rule MF_00484
PRO_0000188630

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7V8F0 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 32FBAD28530F4BD2

FASTA49956,524
        10         20         30         40         50         60 
MRVLFAAAEC APMVKVGGMG DVVGSLPPAL AKLDHDVRLI MPGYGKLWSL LDIPTDPIWR 

        70         80         90        100        110        120 
GQTMGNEFAI YETSHPSNGL PLYLVGHPVF DPERIYGGED EDWRFTFFAS ATTEFAWNVW 

       130        140        150        160        170        180 
KPQVLHCHDW HTGMIPVWMH QDPEISTVFT IHNLKYQGPW RWKLDRMTWC PWYMQGDHTM 

       190        200        210        220        230        240 
AAALLYADRV NAVSPTYARE ICTSEYGESL DGLLNYISGK LRGILNGIDL QDWDPGNDKS 

       250        260        270        280        290        300 
LPATFNADDL SGRAVNKQAL QQRMGLEVNP DTYLLGMVSR LVDQKGVDLL LQVTERLLAY 

       310        320        330        340        350        360 
TDSQIVVLGT GERGLESGLW QLAIQNPGRF SVFLTYDDDL ARLIYGGSDA FLMPSRFEPC 

       370        380        390        400        410        420 
GISQLLAMRY GSVPVVRKVG GLVDTVPSYD PIHQTGTGFC FDRFEPVDFY TALVRSWEAF 

       430        440        450        460        470        480 
RHRDCWRELQ QRGMTQNYSW DRSALDYEQM YRDVCGFKEP SPDAAVVEQF SLGQGSDPSR 

       490 
QNQDSNAKKR TRRKKKGND 

« Hide

References

[1]"Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation."
Rocap G., Larimer F.W., Lamerdin J.E., Malfatti S., Chain P., Ahlgren N.A., Arellano A., Coleman M., Hauser L., Hess W.R., Johnson Z.I., Land M.L., Lindell D., Post A.F., Regala W., Shah M., Shaw S.L., Steglich C. expand/collapse author list , Sullivan M.B., Ting C.S., Tolonen A., Webb E.A., Zinser E.R., Chisholm S.W.
Nature 424:1042-1047(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MIT 9313.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX548175 Genomic DNA. Translation: CAE20578.1.
RefSeqNP_894236.1. NC_005071.1.

3D structure databases

ProteinModelPortalQ7V8F0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING74547.PMT0403.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE20578; CAE20578; PMT_0403.
GeneID1729385.
KEGGpmt:PMT0403.
PATRIC23008655. VBIProMar135351_0485.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_PROMM
AccessionPrimary (citable) accession number: Q7V8F0
Entry history
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: October 1, 2003
Last modified: February 19, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways