Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q7V8B5

- GLGB_PROMM

UniProt

Q7V8B5 - GLGB_PROMM

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Prochlorococcus marinus (strain MIT 9313)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei431 – 4311NucleophileUniRule annotation
Active sitei484 – 4841Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:PMT_0444
OrganismiProchlorococcus marinus (strain MIT 9313)
Taxonomic identifieri74547 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000001423: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7567561,4-alpha-glucan branching enzyme GlgBPRO_0000188728Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi74547.PMT0444.

Structurei

3D structure databases

ProteinModelPortaliQ7V8B5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7V8B5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTSVALDWV VQDGQRLAEC RHDDPFSLLG PQSHEGQWIV RIWMPEASQV
60 70 80 90 100
ELLCDGRTTA MTTPNHSWIF EAALNQNPGR TYQVRVKRAG IVHEQHDPWA
110 120 130 140 150
FHDEWMGEMD RHLFAEGNHH HIWQRMGAHL MEREGVEGVM FCLWAPHACS
160 170 180 190 200
VAVLGELNGW DGRHHPMQRR QGGLWELFIP GFKEGTLYKY EIRTQEGHCY
210 220 230 240 250
QKADPYGFQH EVRPATSSVV ARLDRYQWQD EQWMRQRDSR NALDQPISVY
260 270 280 290 300
EMHLGSWIHA ATDEPYIELD GTPRAPVPAA DMKPGARLLT YPELADQLIP
310 320 330 340 350
YVKDRGFTHI ELMPISEHPF DGSWGYQVTG WYAPTSRFGS PDEFRAFVDR
360 370 380 390 400
CHAEGLGVII DWVPGHFPKD GHGLAFFDGT HLYEHSDPRI GEHKEWGTLI
410 420 430 440 450
FNYSRNEVRN FLVANLVYWF EQFHIDGIRV DAVASMLYRD YLRPDGEWIA
460 470 480 490 500
NEDGGRENTE AVRFLQQANH VLFQHFPGAL SIAEESTTWP MVTQPTDIGG
510 520 530 540 550
LGFNLKWNMG WMHDMLDYFE LDPWFRQFHQ NNITFSIWYA YTENFMLALS
560 570 580 590 600
HDEVVHGKSN LLHKMPGDDW QKFANVRALL AYMWTHPGKK TIFMGMEFGQ
610 620 630 640 650
RSEWNVWGDL QWELLKHDPH KGLQRLVDDL NTFYKGEPAL WKDDFDQYGF
660 670 680 690 700
QWIDCNDNRH SVISFMRRES SGGTWLVVVA NFTPQSHSNY RIGVPMSGYY
710 720 730 740 750
QEVFNTDSSC YGGRNLGNMG GKNTDEFNIH GYEQSLELCL PALSVLVFRH

DPKRSL
Length:756
Mass (Da):87,745
Last modified:October 1, 2003 - v1
Checksum:iECBB3AB60700C4AA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX548175 Genomic DNA. Translation: CAE20619.1.
RefSeqiNP_894277.1. NC_005071.1.
WP_011129823.1. NC_005071.1.

Genome annotation databases

EnsemblBacteriaiCAE20619; CAE20619; PMT_0444.
GeneIDi1729755.
KEGGipmt:PMT0444.
PATRICi23008755. VBIProMar135351_0535.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX548175 Genomic DNA. Translation: CAE20619.1 .
RefSeqi NP_894277.1. NC_005071.1.
WP_011129823.1. NC_005071.1.

3D structure databases

ProteinModelPortali Q7V8B5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 74547.PMT0444.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE20619 ; CAE20619 ; PMT_0444 .
GeneIDi 1729755.
KEGGi pmt:PMT0444.
PATRICi 23008755. VBIProMar135351_0535.

Phylogenomic databases

eggNOGi COG0296.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9313.

Entry informationi

Entry nameiGLGB_PROMM
AccessioniPrimary (citable) accession number: Q7V8B5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: October 1, 2003
Last modified: October 29, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3