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Q7V891 (Q7V891_PROMM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 64. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CAE20649.1
Gene names
Name:gadA EMBL CAE20649.1
Ordered Locus Names:PMT_0474 EMBL CAE20649.1
OrganismProchlorococcus marinus (strain MIT 9313) [Complete proteome] [HAMAP] EMBL CAE20649.1
Taxonomic identifier74547 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus

Protein attributes

Sequence length479 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q7V891 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: A7E5C2459E6338D1

FASTA47953,548
        10         20         30         40         50         60 
MALHRSNPRS NDLEEHAIGE TVDALVSPLP RTTFPQEYRP ALTTFNLLKE ELLLDGNSKQ 

        70         80         90        100        110        120 
NLATFCQTYE SQQVAELMAL AVDKNLIDKD EYPQTAEIER RCVSMMADLW HAPGEAVGCS 

       130        140        150        160        170        180 
TIGSSEAAML GGLAAKWRWR EHRKAAGQSI DRPNMVCGSV QICWTKFARY WDVELREVEM 

       190        200        210        220        230        240 
TSGELCMSPE RMLEQVDENT IVVVPTLGVT YHGLYEDVQA VSQALDELQQ RKGLDIPIHV 

       250        260        270        280        290        300 
DAASGGFLAP FCAPDLAPWD FRLPRVKSIN SSGHKFGLAP LGVGWVLWRE SRDLPEGLVF 

       310        320        330        340        350        360 
HVSYLGGDMP TFQINFSRPA GQVISQYYDF VRLGRDGYQA IHGASYANAQ YVAQELKKLG 

       370        380        390        400        410        420 
PFELINDGNP AGGIPTVVWT LRADQELGFN LYDLSDRLRL RGWQVPAYPF TGELAHQAFQ 

       430        440        450        460        470 
RILVKRDFSR EMADLLLTDI RNAITHFESH PVKISLNANE AASTNHLGRS MVECRDAHG 

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References

[1]"Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation."
Rocap G., Larimer F.W., Lamerdin J.E., Malfatti S., Chain P., Ahlgren N.A., Arellano A., Coleman M., Hauser L., Hess W.R., Johnson Z.I., Land M.L., Lindell D., Post A.F., Regala W., Shah M., Shaw S.L., Steglich C. expand/collapse author list , Sullivan M.B., Ting C.S., Tolonen A., Webb E.A., Zinser E.R., Chisholm S.W.
Nature 424:1042-1047(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MIT 9313.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX548175 Genomic DNA. Translation: CAE20649.1.
RefSeqNP_894307.1. NC_005071.1.

3D structure databases

ProteinModelPortalQ7V891.
SMRQ7V891. Positions 23-451.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING74547.PMT0474.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAE20649; CAE20649; PMT_0474.
GeneID1728133.
KEGGpmt:PMT0474.
PATRIC23008827. VBIProMar135351_0570.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
KOK01580.
OMAPTFQINF.
OrthoDBEOG6TFCPW.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ7V891_PROMM
AccessionPrimary (citable) accession number: Q7V891
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: May 14, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)