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Protein

Glutamate decarboxylase

Gene

gadA

Organism
Prochlorococcus marinus (strain MIT 9313)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:gadAImported
Ordered Locus Names:PMT_0474Imported
OrganismiProchlorococcus marinus (strain MIT 9313)Imported
Taxonomic identifieri74547 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000001423 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi74547.PMT0474.

Structurei

3D structure databases

ProteinModelPortaliQ7V891.
SMRiQ7V891. Positions 23-451.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7V891-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALHRSNPRS NDLEEHAIGE TVDALVSPLP RTTFPQEYRP ALTTFNLLKE
60 70 80 90 100
ELLLDGNSKQ NLATFCQTYE SQQVAELMAL AVDKNLIDKD EYPQTAEIER
110 120 130 140 150
RCVSMMADLW HAPGEAVGCS TIGSSEAAML GGLAAKWRWR EHRKAAGQSI
160 170 180 190 200
DRPNMVCGSV QICWTKFARY WDVELREVEM TSGELCMSPE RMLEQVDENT
210 220 230 240 250
IVVVPTLGVT YHGLYEDVQA VSQALDELQQ RKGLDIPIHV DAASGGFLAP
260 270 280 290 300
FCAPDLAPWD FRLPRVKSIN SSGHKFGLAP LGVGWVLWRE SRDLPEGLVF
310 320 330 340 350
HVSYLGGDMP TFQINFSRPA GQVISQYYDF VRLGRDGYQA IHGASYANAQ
360 370 380 390 400
YVAQELKKLG PFELINDGNP AGGIPTVVWT LRADQELGFN LYDLSDRLRL
410 420 430 440 450
RGWQVPAYPF TGELAHQAFQ RILVKRDFSR EMADLLLTDI RNAITHFESH
460 470
PVKISLNANE AASTNHLGRS MVECRDAHG
Length:479
Mass (Da):53,548
Last modified:October 1, 2003 - v1
Checksum:iA7E5C2459E6338D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX548175 Genomic DNA. Translation: CAE20649.1.
RefSeqiNP_894307.1. NC_005071.1.
WP_011129853.1. NC_005071.1.

Genome annotation databases

EnsemblBacteriaiCAE20649; CAE20649; PMT_0474.
KEGGipmt:PMT0474.
PATRICi23008827. VBIProMar135351_0570.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX548175 Genomic DNA. Translation: CAE20649.1.
RefSeqiNP_894307.1. NC_005071.1.
WP_011129853.1. NC_005071.1.

3D structure databases

ProteinModelPortaliQ7V891.
SMRiQ7V891. Positions 23-451.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi74547.PMT0474.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE20649; CAE20649; PMT_0474.
KEGGipmt:PMT0474.
PATRICi23008827. VBIProMar135351_0570.

Phylogenomic databases

eggNOGiCOG0076.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MIT 9313Imported.

Entry informationi

Entry nameiQ7V891_PROMM
AccessioniPrimary (citable) accession number: Q7V891
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: May 27, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.