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Protein
Submitted name:

Possible uncharacterized restriction enzyme, interrupted-C

Gene

spnII-interrupted-C

Organism
Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciPMAR59919:GJMQ-400-MONOMER.

Protein family/group databases

REBASEi7329. PmaCCORF384P.

Names & Taxonomyi

Protein namesi
Submitted name:
Possible uncharacterized restriction enzyme, interrupted-CImported (EC:3.1.21.4Imported)
Gene namesi
Name:spnII-interrupted-CImported
Ordered Locus Names:PMM0384Imported
OrganismiProchlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4)Imported
Taxonomic identifieri59919 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaProchloralesProchlorococcaceaeProchlorococcus
ProteomesiUP000001026: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi59919.PMM0384.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG13119.
HOGENOMiHOG000229494.
KOiK01155.
OMAiYFQAAFR.
OrthoDBiEOG6RC3KH.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR006935. Helicase/UvrB_dom.
IPR027417. P-loop_NTPase.
IPR018306. Phage_T5_Orf172_DNA-bd.
[Graphical view]
PfamiPF04851. ResIII. 1 hit.
PF10544. T5orf172. 1 hit.
[Graphical view]
SMARTiSM00974. T5orf172. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.

Sequencei

Sequence statusi: Complete.

Q7V2T1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKDFFYKRY EGNPKIYAYS DSHPQYQGLL KVGFTSKNTV KQRVEAQYPI
60 70 80 90 100
ITPGEETYTI HLDRSAIRKD GTSFIDKDVH KILRAKGFPN PAGEWFRCKV
110 120 130 140 150
TDVNAAIDLV AFGDIGVEGR PNNFGLRPEQ KEAIEKTKNY INGFIKEKSN
160 170 180 190 200
KVPHFLWNAK MRFGKTFAAY KLALEMKWTK VLVLTFKPAV QSAWEEDLLT
210 220 230 240 250
HIDFEGWQFI NRNGMSFGEA DKSKPFVCFG SFQDFLGKNN AGGIKPKNEW
260 270 280 290 300
VHTIKWDCVI LDEYHYGAWR ERAKELFEGE ENKEIKLQEG EGISFFKEEN
310 320 330 340 350
MPISTNFYLY LSGTPFRAIS TGEFIEEQIF NWTYSDEQNA KNNWVGDKNP
360 370 380 390 400
YSSLPRMILM TYKVPDYILE VANEGEFDEF DLNTFFSAKY EDDASEFIYK
410 420 430 440 450
DEVQKWLDLI RGQNLEEIKT TLKLKDKKPP YPFSDSRLLS LLSHTFWYLP
460 470 480 490 500
NVSSCFAMRN LLQERQNTFF HSYKIIVAAG NKAGLGLKAL WPVRDAMDNP
510 520 530 540 550
LESKSITLSC GKLTTGVSVK PWSGIFMLRN ISSPETYFQS AFRVQTPWEI
560 570 580 590 600
ENPDSKSPNE KDVLKHNCYV FDFAPNRALT QISDYSCNLN YQENDPEKKV
610 620 630 640 650
GEFIKFLPVL SYDGSSMIEV DATSILDMTI SGTTATLLAR RWESALLVNV
660 670 680 690 700
DNSTLERLMG NDEAMKALQA IEGFRSLNED ITSIINSSES IKNLKTKANE
710 720 730 740 750
EELNKKEKKQ LTEQEKEFIN LRKKIQKQLI KFATRIPIFM YLTDYRERSL
760 770 780 790 800
KDVITQLEPG LFKKVTGLSL KDFDLLISLN VFNSSLMNDA IYNFKRYEDS
810 820
SLSYIGLTKN THDEVGLFDT VISREEFEI
Length:829
Mass (Da):95,601
Last modified:October 1, 2003 - v1
Checksum:i311C8F5F13F9B2D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX548174 Genomic DNA. Translation: CAE18843.1.
RefSeqiNP_892503.1. NC_005072.1.

Genome annotation databases

EnsemblBacteriaiCAE18843; CAE18843; PMM0384.
GeneIDi1726323.
KEGGipmm:PMM0384.
PATRICi23031504. VBIProMar68066_0426.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX548174 Genomic DNA. Translation: CAE18843.1.
RefSeqiNP_892503.1. NC_005072.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi59919.PMM0384.

Protein family/group databases

REBASEi7329. PmaCCORF384P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE18843; CAE18843; PMM0384.
GeneIDi1726323.
KEGGipmm:PMM0384.
PATRICi23031504. VBIProMar68066_0426.

Phylogenomic databases

eggNOGiNOG13119.
HOGENOMiHOG000229494.
KOiK01155.
OMAiYFQAAFR.
OrthoDBiEOG6RC3KH.

Enzyme and pathway databases

BioCyciPMAR59919:GJMQ-400-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR006935. Helicase/UvrB_dom.
IPR027417. P-loop_NTPase.
IPR018306. Phage_T5_Orf172_DNA-bd.
[Graphical view]
PfamiPF04851. ResIII. 1 hit.
PF10544. T5orf172. 1 hit.
[Graphical view]
SMARTiSM00974. T5orf172. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCMP1986 / MED4Imported.

Entry informationi

Entry nameiQ7V2T1_PROMP
AccessioniPrimary (citable) accession number: Q7V2T1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: March 4, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.