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Q7V275 (GLGA_PROMP) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycogen synthase
EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:PMM0609
OrganismProchlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) [Complete proteome] [HAMAP]
Taxonomic identifier59919 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Prochlorophytes › Prochlorococcaceae › Prochlorococcus

Protein attributes

Sequence length483 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstarch synthase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 483483Glycogen synthase HAMAP MF_00484
PRO_0000188631

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7V275 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 22A211F187E0AB9E

FASTA48354,924
        10         20         30         40         50         60 
MRILLAAAEC APMIKVGGMG DVVGSLPPSL IKLGHDVRVI IPGYSKLWNL LEVSSEPVFR 

        70         80         90        100        110        120 
ANTMGNDFSV YEAKHPIHNY VIYLVGHPTF DSGHIYGGED EDWRFTFFAS ATAEFSWNCW 

       130        140        150        160        170        180 
KPQVLHCHDW HTGMIPVWMH QDPEVSTVFT IHNLKYQGPW RWKLEKMTWC PWYMHGDHTM 

       190        200        210        220        230        240 
AAAMLYADRV NAVSPTYADE IKTHEYGESL EGLLNYISGK LRGILNGIDL NEWDPDKDKV 

       250        260        270        280        290        300 
LPAQFNIKNL ESRLENKIIL QKEMGLEVNS KKYLLGMVSR LVDQKGVDLV LQVSRRLLAY 

       310        320        330        340        350        360 
TDSQIAILGT GDRSLESGLW QLALDYPGRF SVFLTYDDSL SRLIYGGSDA FLMPSRFEPC 

       370        380        390        400        410        420 
GISQLLAMRY GSIPIVRRVG GLVDTVLPHD PENNSGTGFC FDRFEPIDFY TALVRSWEAF 

       430        440        450        460        470        480 
RHKDSWKSLQ LRAMSQEFSW QRSALEYESM YKDVCGIKAP SPDIAEIEKF SYGQSADPSL 


KTM

« Hide

References

[1]"Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation."
Rocap G., Larimer F.W., Lamerdin J.E., Malfatti S., Chain P., Ahlgren N.A., Arellano A., Coleman M., Hauser L., Hess W.R., Johnson Z.I., Land M.L., Lindell D., Post A.F., Regala W., Shah M., Shaw S.L., Steglich C. expand/collapse author list , Sullivan M.B., Ting C.S., Tolonen A., Webb E.A., Zinser E.R., Chisholm S.W.
Nature 424:1042-1047(2003) [PubMed: 12917642] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCMP1986 / MED4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BX548174 Genomic DNA. Translation: CAE19068.1.
RefSeqNP_892727.1. NC_005072.1.

3D structure databases

ProteinModelPortalQ7V275.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ7V275.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1726433.
GenomeReviewsGene locus PMM0609 in contig BX548174_GR.
KEGGpmm:PMM0609.
NMPDRfig|59919.1.peg.606.
PATRIC23031990. VBIProMar68066_0664.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHBG596384.
OMAPIVHEIG.
PhylomeDBQ7V275.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycPMAR167540:PMM0609-MONOMER.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
[Tree]
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
KOK00703.
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. GlgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_PROMP
AccessionPrimary (citable) accession number: Q7V275
Entry history
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: October 1, 2003
Last modified: January 25, 2012
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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