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Q7UX47

- Q7UX47_RHOBA

UniProt

Q7UX47 - Q7UX47_RHOBA

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Protein
Submitted name:

Thermostable DNA ligase

Gene
dnlI, RB1571
Organism
Rhodopirellula baltica (strain SH1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Thermostable DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:dnlIImported
Ordered Locus Names:RB1571Imported
OrganismiRhodopirellula baltica (strain SH1)
Taxonomic identifieri243090 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
ProteomesiUP000001025: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243090.RB1571.

Structurei

3D structure databases

ProteinModelPortaliQ7UX47.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK01971.
OMAiKSASTHN.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7UX47-1 [UniParc]FASTAAdd to Basket

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MKLFAELFQR LDQTTKTNEK VAAIAQYMSA ASPEDAAWAI ASLSGRRVKR    50
LVSTGLLRRL AAESAEIPDW LFEESYDSVG DLAETISLLV PAGNSPDADF 100
RSLSDWMQND VLPLARMDES EQSDAVRRMW AQTEGTSRLI LMKLITGSFR 150
VGVSSRLVAR GIAESNGLPA DVIAHRLMGD WDPTPDFIER LHSTDLNDAT 200
HSRPYPFCLA HALADDANAE GDGPDWQTLG DPSEYQAEWK WDGIRGQVIR 250
RAGRTYIWSR GEDLMVNRWP EIERAAEFLP DGTVIDGEIL ASRHVSPALD 300
DSKQAIEVLP FAQLQRRIGR KTVGKKLLTE VPVMFHAFDC LELDGNDLRA 350
KPLGDRRDAL LKMLSIHQPP SVVWNEPLSF DSWDDLAAIR STSRHALAEG 400
VMIKRLDAPY SVGRVRGVWW KWKLAPHTVD AVLIYAQRGH GKRASLYTDY 450
TFAVWDEDKL VPFAKAYSGL TDAEIRKVDR FVRDNTSERF GPVRSVKPEL 500
VMELAFEGLQ RSTRHKSGIA TRFPRIVRWR TDKQPADADR LADLIAMLPE 550
EESKVIASGS EEVP 564
Length:564
Mass (Da):63,328
Last modified:October 1, 2003 - v1
Checksum:iC668E51873585F31
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX294135 Genomic DNA. Translation: CAD72165.1.
RefSeqiNP_864484.1. NC_005027.1.

Genome annotation databases

EnsemblBacteriaiCAD72165; CAD72165; RB1571.
GeneIDi1795706.
KEGGirba:RB1571.
PATRICi23242885. VBIRhoBal59814_0732.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX294135 Genomic DNA. Translation: CAD72165.1 .
RefSeqi NP_864484.1. NC_005027.1.

3D structure databases

ProteinModelPortali Q7UX47.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243090.RB1571.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAD72165 ; CAD72165 ; RB1571 .
GeneIDi 1795706.
KEGGi rba:RB1571.
PATRICi 23242885. VBIRhoBal59814_0732.

Phylogenomic databases

HOGENOMi HOG000036007.
KOi K01971.
OMAi KSASTHN.
OrthoDBi EOG6Q8HXT.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SH1.

Entry informationi

Entry nameiQ7UX47_RHOBA
AccessioniPrimary (citable) accession number: Q7UX47
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: May 14, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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