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Q7UX47 (Q7UX47_RHOBA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL CAD72165.1
Gene names
Name:dnlI EMBL CAD72165.1
Ordered Locus Names:RB1571 EMBL CAD72165.1
OrganismRhodopirellula baltica (strain SH1) [Reference proteome] [HAMAP]
Taxonomic identifier243090 [NCBI]
Taxonomic lineageBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q7UX47 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: C668E51873585F31

FASTA56463,328
        10         20         30         40         50         60 
MKLFAELFQR LDQTTKTNEK VAAIAQYMSA ASPEDAAWAI ASLSGRRVKR LVSTGLLRRL 

        70         80         90        100        110        120 
AAESAEIPDW LFEESYDSVG DLAETISLLV PAGNSPDADF RSLSDWMQND VLPLARMDES 

       130        140        150        160        170        180 
EQSDAVRRMW AQTEGTSRLI LMKLITGSFR VGVSSRLVAR GIAESNGLPA DVIAHRLMGD 

       190        200        210        220        230        240 
WDPTPDFIER LHSTDLNDAT HSRPYPFCLA HALADDANAE GDGPDWQTLG DPSEYQAEWK 

       250        260        270        280        290        300 
WDGIRGQVIR RAGRTYIWSR GEDLMVNRWP EIERAAEFLP DGTVIDGEIL ASRHVSPALD 

       310        320        330        340        350        360 
DSKQAIEVLP FAQLQRRIGR KTVGKKLLTE VPVMFHAFDC LELDGNDLRA KPLGDRRDAL 

       370        380        390        400        410        420 
LKMLSIHQPP SVVWNEPLSF DSWDDLAAIR STSRHALAEG VMIKRLDAPY SVGRVRGVWW 

       430        440        450        460        470        480 
KWKLAPHTVD AVLIYAQRGH GKRASLYTDY TFAVWDEDKL VPFAKAYSGL TDAEIRKVDR 

       490        500        510        520        530        540 
FVRDNTSERF GPVRSVKPEL VMELAFEGLQ RSTRHKSGIA TRFPRIVRWR TDKQPADADR 

       550        560 
LADLIAMLPE EESKVIASGS EEVP 

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References

[1]"Complete genome sequence of the marine planctomycete Pirellula sp. strain 1."
Gloeckner F.O., Kube M., Bauer M., Teeling H., Lombardot T., Ludwig W., Gade D., Beck A., Borzym K., Heitmann K., Rabus R., Schlesner H., Amann R., Reinhardt R.
Proc. Natl. Acad. Sci. U.S.A. 100:8298-8303(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SH1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX294135 Genomic DNA. Translation: CAD72165.1.
RefSeqNP_864484.1. NC_005027.1.

3D structure databases

ProteinModelPortalQ7UX47.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243090.RB1571.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAD72165; CAD72165; RB1571.
GeneID1795706.
KEGGrba:RB1571.
PATRIC23242885. VBIRhoBal59814_0732.

Phylogenomic databases

HOGENOMHOG000036007.
KOK01971.
OMAKSASTHN.
OrthoDBEOG6Q8HXT.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ7UX47_RHOBA
AccessionPrimary (citable) accession number: Q7UX47
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: May 14, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)