Q7UX47 (Q7UX47_RHOBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Thermostable DNA ligase EMBL CAD72165.1
EC=6.5.1.1 EMBL CAD72165.1

Gene names

Name:	dnlI EMBL CAD72165.1
Ordered Locus Names:	RB1571

Organism

Rhodopirellula baltica (strain SH1) [Reference proteome] [HAMAP]

Taxonomic identifier

243090 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Planctomycetes › Planctomycetia › Planctomycetales › Planctomycetaceae › Rhodopirellula › Rhodopirellula baltica

Protein attributes

Sequence length	564 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CAD72165.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7UX47 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: C668E51873585F31	FASTA	564	63,328
	10 20 30 40 50 60 MKLFAELFQR LDQTTKTNEK VAAIAQYMSA ASPEDAAWAI ASLSGRRVKR LVSTGLLRRL 70 80 90 100 110 120 AAESAEIPDW LFEESYDSVG DLAETISLLV PAGNSPDADF RSLSDWMQND VLPLARMDES 130 140 150 160 170 180 EQSDAVRRMW AQTEGTSRLI LMKLITGSFR VGVSSRLVAR GIAESNGLPA DVIAHRLMGD 190 200 210 220 230 240 WDPTPDFIER LHSTDLNDAT HSRPYPFCLA HALADDANAE GDGPDWQTLG DPSEYQAEWK 250 260 270 280 290 300 WDGIRGQVIR RAGRTYIWSR GEDLMVNRWP EIERAAEFLP DGTVIDGEIL ASRHVSPALD 310 320 330 340 350 360 DSKQAIEVLP FAQLQRRIGR KTVGKKLLTE VPVMFHAFDC LELDGNDLRA KPLGDRRDAL 370 380 390 400 410 420 LKMLSIHQPP SVVWNEPLSF DSWDDLAAIR STSRHALAEG VMIKRLDAPY SVGRVRGVWW 430 440 450 460 470 480 KWKLAPHTVD AVLIYAQRGH GKRASLYTDY TFAVWDEDKL VPFAKAYSGL TDAEIRKVDR 490 500 510 520 530 540 FVRDNTSERF GPVRSVKPEL VMELAFEGLQ RSTRHKSGIA TRFPRIVRWR TDKQPADADR 550 560 LADLIAMLPE EESKVIASGS EEVP

References

[1]

"Complete genome sequence of the marine planctomycete Pirellula sp. strain 1." Gloeckner F.O., Kube M., Bauer M., Teeling H., Lombardot T., Ludwig W., Gade D., Beck A., Borzym K., Heitmann K., Rabus R., Schlesner H., Amann R., Reinhardt R. Proc. Natl. Acad. Sci. U.S.A. 100:8298-8303(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SH1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX294135 Genomic DNA. Translation: CAD72165.1.
RefSeq	NP_864484.1. NC_005027.1.
3D structure databases
ProteinModelPortal	Q7UX47.
ModBase	Search...
Protein-protein interaction databases
STRING	243090.RB1571.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAD72165; CAD72165; RB1571.
GeneID	1795706.
KEGG	rba:RB1571.
PATRIC	23242885. VBIRhoBal59814_0732.
Phylogenomic databases
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	PRK09247.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7UX47_RHOBA

Accession

Primary (citable) accession number: Q7UX47

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	May 1, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)