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Q7UX47

- Q7UX47_RHOBA

UniProt

Q7UX47 - Q7UX47_RHOBA

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Protein
Submitted name:

Thermostable DNA ligase

Gene

dnlI

Organism
Rhodopirellula baltica (strain SH1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Thermostable DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:dnlIImported
Ordered Locus Names:RB1571Imported
OrganismiRhodopirellula baltica (strain SH1)Imported
Taxonomic identifieri243090 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
ProteomesiUP000001025: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243090.RB1571.

Structurei

3D structure databases

ProteinModelPortaliQ7UX47.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
InParanoidiQ7UX47.
KOiK01971.
OMAiKSASTHN.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7UX47-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKLFAELFQR LDQTTKTNEK VAAIAQYMSA ASPEDAAWAI ASLSGRRVKR
60 70 80 90 100
LVSTGLLRRL AAESAEIPDW LFEESYDSVG DLAETISLLV PAGNSPDADF
110 120 130 140 150
RSLSDWMQND VLPLARMDES EQSDAVRRMW AQTEGTSRLI LMKLITGSFR
160 170 180 190 200
VGVSSRLVAR GIAESNGLPA DVIAHRLMGD WDPTPDFIER LHSTDLNDAT
210 220 230 240 250
HSRPYPFCLA HALADDANAE GDGPDWQTLG DPSEYQAEWK WDGIRGQVIR
260 270 280 290 300
RAGRTYIWSR GEDLMVNRWP EIERAAEFLP DGTVIDGEIL ASRHVSPALD
310 320 330 340 350
DSKQAIEVLP FAQLQRRIGR KTVGKKLLTE VPVMFHAFDC LELDGNDLRA
360 370 380 390 400
KPLGDRRDAL LKMLSIHQPP SVVWNEPLSF DSWDDLAAIR STSRHALAEG
410 420 430 440 450
VMIKRLDAPY SVGRVRGVWW KWKLAPHTVD AVLIYAQRGH GKRASLYTDY
460 470 480 490 500
TFAVWDEDKL VPFAKAYSGL TDAEIRKVDR FVRDNTSERF GPVRSVKPEL
510 520 530 540 550
VMELAFEGLQ RSTRHKSGIA TRFPRIVRWR TDKQPADADR LADLIAMLPE
560
EESKVIASGS EEVP
Length:564
Mass (Da):63,328
Last modified:October 1, 2003 - v1
Checksum:iC668E51873585F31
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX294135 Genomic DNA. Translation: CAD72165.1.
RefSeqiNP_864484.1. NC_005027.1.

Genome annotation databases

EnsemblBacteriaiCAD72165; CAD72165; RB1571.
GeneIDi1795706.
KEGGirba:RB1571.
PATRICi23242885. VBIRhoBal59814_0732.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX294135 Genomic DNA. Translation: CAD72165.1 .
RefSeqi NP_864484.1. NC_005027.1.

3D structure databases

ProteinModelPortali Q7UX47.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243090.RB1571.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAD72165 ; CAD72165 ; RB1571 .
GeneIDi 1795706.
KEGGi rba:RB1571.
PATRICi 23242885. VBIRhoBal59814_0732.

Phylogenomic databases

HOGENOMi HOG000036007.
InParanoidi Q7UX47.
KOi K01971.
OMAi KSASTHN.
OrthoDBi EOG6Q8HXT.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SH1Imported.

Entry informationi

Entry nameiQ7UX47_RHOBA
AccessioniPrimary (citable) accession number: Q7UX47
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: October 29, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3