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Q7UX47

- Q7UX47_RHOBA

UniProt

Q7UX47 - Q7UX47_RHOBA

Protein
Submitted name:

Thermostable DNA ligase

Gene

dnlI

Organism
Rhodopirellula baltica (strain SH1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Thermostable DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:dnlIImported
    Ordered Locus Names:RB1571Imported
    OrganismiRhodopirellula baltica (strain SH1)Imported
    Taxonomic identifieri243090 [NCBI]
    Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
    ProteomesiUP000001025: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi243090.RB1571.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7UX47.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiKSASTHN.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7UX47-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLFAELFQR LDQTTKTNEK VAAIAQYMSA ASPEDAAWAI ASLSGRRVKR    50
    LVSTGLLRRL AAESAEIPDW LFEESYDSVG DLAETISLLV PAGNSPDADF 100
    RSLSDWMQND VLPLARMDES EQSDAVRRMW AQTEGTSRLI LMKLITGSFR 150
    VGVSSRLVAR GIAESNGLPA DVIAHRLMGD WDPTPDFIER LHSTDLNDAT 200
    HSRPYPFCLA HALADDANAE GDGPDWQTLG DPSEYQAEWK WDGIRGQVIR 250
    RAGRTYIWSR GEDLMVNRWP EIERAAEFLP DGTVIDGEIL ASRHVSPALD 300
    DSKQAIEVLP FAQLQRRIGR KTVGKKLLTE VPVMFHAFDC LELDGNDLRA 350
    KPLGDRRDAL LKMLSIHQPP SVVWNEPLSF DSWDDLAAIR STSRHALAEG 400
    VMIKRLDAPY SVGRVRGVWW KWKLAPHTVD AVLIYAQRGH GKRASLYTDY 450
    TFAVWDEDKL VPFAKAYSGL TDAEIRKVDR FVRDNTSERF GPVRSVKPEL 500
    VMELAFEGLQ RSTRHKSGIA TRFPRIVRWR TDKQPADADR LADLIAMLPE 550
    EESKVIASGS EEVP 564
    Length:564
    Mass (Da):63,328
    Last modified:October 1, 2003 - v1
    Checksum:iC668E51873585F31
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX294135 Genomic DNA. Translation: CAD72165.1.
    RefSeqiNP_864484.1. NC_005027.1.

    Genome annotation databases

    EnsemblBacteriaiCAD72165; CAD72165; RB1571.
    GeneIDi1795706.
    KEGGirba:RB1571.
    PATRICi23242885. VBIRhoBal59814_0732.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX294135 Genomic DNA. Translation: CAD72165.1 .
    RefSeqi NP_864484.1. NC_005027.1.

    3D structure databases

    ProteinModelPortali Q7UX47.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243090.RB1571.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAD72165 ; CAD72165 ; RB1571 .
    GeneIDi 1795706.
    KEGGi rba:RB1571.
    PATRICi 23242885. VBIRhoBal59814_0732.

    Phylogenomic databases

    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi KSASTHN.
    OrthoDBi EOG6Q8HXT.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SH1Imported.

    Entry informationi

    Entry nameiQ7UX47_RHOBA
    AccessioniPrimary (citable) accession number: Q7UX47
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2003
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3