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Q7UX42 (SYQ_RHOBA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glutamine--tRNA ligase

EC=6.1.1.18
Alternative name(s):
Glutaminyl-tRNA synthetase
Short name=GlnRS
Gene names
Name:glnS
Ordered Locus Names:RB1578
OrganismRhodopirellula baltica (strain SH1) [Reference proteome] [HAMAP]
Taxonomic identifier243090 [NCBI]
Taxonomic lineageBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula

Protein attributes

Sequence length601 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln). HAMAP-Rule MF_00126

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00126

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00126.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglutaminyl-tRNA aminoacylation

Inferred from electronic annotation. Source: InterPro

glutamyl-tRNA aminoacylation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

glutamine-tRNA ligase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 601601Glutamine--tRNA ligase HAMAP-Rule MF_00126
PRO_0000195847

Regions

Motif76 – 8611"HIGH" region HAMAP-Rule MF_00126
Motif308 – 3125"KMSKS" region HAMAP-Rule MF_00126

Sites

Binding site3111ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7UX42 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 0C6B526811FF4CD3

FASTA60168,668
        10         20         30         40         50         60 
MARANRGEHS TLSTFWQSRH NAASFDPLYR RIDVNAPEPS DSATPEKTPS KHFIRQAIDA 

        70         80         90        100        110        120 
DLASGRFDGV ATRFPPEPNG YLHIGHAKSI CLNFGLAKDM GGTCNLRFDD TNPIKEDTEY 

       130        140        150        160        170        180 
VDSIQEDVRW LGFEWDNLHF ASDYFDQLYD WAEQLVKDGK AYVCDLTAEE TREYRGTLTE 

       190        200        210        220        230        240 
PGKNSPHRDR TPEKNLELLR AMKAGKFKDG EKTLRAKIDM ASPNINLRDP VMYRIAHVPH 

       250        260        270        280        290        300 
HRTGDKWCIY PMYDWAHGQS DSLEKITFSI CTLEFEHHRP LYNWYCENLG IHHPRQIEFA 

       310        320        330        340        350        360 
RLNMTFTVMS KRKLLQLVKE NHVTGWDDPR MPTLVGLRRR GYTPESIRSF CADIGVAKFN 

       370        380        390        400        410        420 
STIDVIRLEN SVREHLNSVA PRRMAVLDPI KLTITNWPEG KVEMMNAINN PEDESAGSRE 

       430        440        450        460        470        480 
IPFSGELYIE TEDFREEAPR KFFRLKKGGS VRLRSGYIVD CHDVVKDADG NVTEVLCTYD 

       490        500        510        520        530        540 
PETKSGEDTS GRKVKGTIHW VSREHAQKVT VRNYDRLFKV ENPDASSDTG SFLDHLNPDS 

       550        560        570        580        590        600 
LTTLTAHVEP ALAEAAVGDR VQFERLGYYV VDPDSTDGEI IFNRIVPLRD TWGKIEAKGK 


K 

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References

[1]"Complete genome sequence of the marine planctomycete Pirellula sp. strain 1."
Gloeckner F.O., Kube M., Bauer M., Teeling H., Lombardot T., Ludwig W., Gade D., Beck A., Borzym K., Heitmann K., Rabus R., Schlesner H., Amann R., Reinhardt R.
Proc. Natl. Acad. Sci. U.S.A. 100:8298-8303(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SH1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX294135 Genomic DNA. Translation: CAD72170.1.
RefSeqNP_864489.1. NC_005027.1.

3D structure databases

ProteinModelPortalQ7UX42.
SMRQ7UX42. Positions 52-591.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243090.RB1578.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAD72170; CAD72170; RB1578.
GeneID1794210.
KEGGrba:RB1578.
PATRIC23242895. VBIRhoBal59814_0737.

Phylogenomic databases

eggNOGCOG0008.
HOGENOMHOG000259232.
KOK01886.
OMAVTHSICT.
OrthoDBEOG6DRPF7.
ProtClustDBPRK05347.

Family and domain databases

Gene3D1.10.1160.10. 1 hit.
2.40.240.10. 2 hits.
3.40.50.620. 2 hits.
HAMAPMF_00126. Gln_tRNA_synth.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR004514. Gln-tRNA-synth.
IPR022861. Gln_tRNA_ligase_bac.
IPR000924. Glu/Gln-tRNA-synth.
IPR020061. Glu/Gln-tRNA-synth_Ib_a-bdl.
IPR020058. Glu/Gln-tRNA-synth_Ib_cat-dom.
IPR020059. Glu/Gln-tRNA-synth_Ib_codon-bd.
IPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PANTHERPTHR10119. PTHR10119. 1 hit.
PfamPF00749. tRNA-synt_1c. 1 hit.
PF03950. tRNA-synt_1c_C. 1 hit.
[Graphical view]
PRINTSPR00987. TRNASYNTHGLU.
SUPFAMSSF50715. SSF50715. 1 hit.
TIGRFAMsTIGR00440. glnS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYQ_RHOBA
AccessionPrimary (citable) accession number: Q7UX42
Entry history
Integrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: October 1, 2003
Last modified: February 19, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries