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Q7UVH1

- GLGB_RHOBA

UniProt

Q7UVH1 - GLGB_RHOBA

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Rhodopirellula baltica (strain SH1)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei415 – 4151NucleophileUniRule annotation
Active sitei468 – 4681Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:RB2638
OrganismiRhodopirellula baltica (strain SH1)
Taxonomic identifieri243090 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
ProteomesiUP000001025: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7367361,4-alpha-glucan branching enzyme GlgBPRO_0000188736Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi243090.RB2638.

Structurei

3D structure databases

ProteinModelPortaliQ7UVH1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
InParanoidiQ7UVH1.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7UVH1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNSQLSLSTI QSLVDGSVAN PGSLLGRHPV NYRGREATSV RVLEPNAESV
60 70 80 90 100
WLIDSASGLR RPMRRLHPGG FFEAICDEPI TKPSTSRLQM IDKTGKEIKT
110 120 130 140 150
TSPYTVPSIF SDLDRYLIGE GRHNQLYERL GAQLREVDGV KGVNFAVWAP
160 170 180 190 200
NARSVQVVGD FNGWDGRGHV AQPVESTGIW ELFLPGATVG QKYKFRIQTQ
210 220 230 240 250
HGHWMDKCDP MAFAAELPPL TANIITDINT YSWNDSDWLQ QRAEMDPMHT
260 270 280 290 300
PMNVYEVHLG SWQKGPGRTH GWLDYRDLAK RLVDYCHRMN FTHVELMPIS
310 320 330 340 350
EHPFTGSWGY QSVGYYAPTS RHGSPEDFMF FVDHMHQNGI GVLIDWVPAH
360 370 380 390 400
FPKDDHGLRQ FDGSALYEHA DPRQGEHPDW GTMIFNFGRN EVKNFLIANA
410 420 430 440 450
LFWLDKYHID GLRVDAVASM LYLDYSREDG EWIPNRYGGR ENLESIDFLR
460 470 480 490 500
DFNIAVHENH PGVITAAEES TAWPGVSRPT YDGGLGFTYK WNMGWMNDTL
510 520 530 540 550
SYMRNEPIHR KFHQNELTFS LIYAFTENFT LPLSHDEVVH GKGSLISQMP
560 570 580 590 600
GDMWQKFANL RLLYSYMWTH PGKKLLFMGG EIAQWTEWNA DDGPQWELLD
610 620 630 640 650
FDTHRGVQQL VADLNKVVIE NPALHWHDFT GDGFEWIDAH NAEDSVLVYL
660 670 680 690 700
RKGAEGDPPI LVCNNFTPVP RDNYRVGVPA QGFWKEIFNS DGEAYGGSNL
710 720 730
GNYPGCQTTG IEHHARPDSI EVTLPPLGTT ILRLES
Length:736
Mass (Da):83,639
Last modified:October 1, 2003 - v1
Checksum:iADD83793F4B9327D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX294137 Genomic DNA. Translation: CAD72753.1.
RefSeqiNP_865069.1. NC_005027.1.

Genome annotation databases

EnsemblBacteriaiCAD72753; CAD72753; RB2638.
GeneIDi1793727.
KEGGirba:RB2638.
PATRICi23243849. VBIRhoBal59814_1210.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX294137 Genomic DNA. Translation: CAD72753.1 .
RefSeqi NP_865069.1. NC_005027.1.

3D structure databases

ProteinModelPortali Q7UVH1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243090.RB2638.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAD72753 ; CAD72753 ; RB2638 .
GeneIDi 1793727.
KEGGi rba:RB2638.
PATRICi 23243849. VBIRhoBal59814_1210.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
InParanoidi Q7UVH1.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SH1.

Entry informationi

Entry nameiGLGB_RHOBA
AccessioniPrimary (citable) accession number: Q7UVH1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: October 1, 2003
Last modified: October 29, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3