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Q7UVH1

- GLGB_RHOBA

UniProt

Q7UVH1 - GLGB_RHOBA

Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Rhodopirellula baltica (strain SH1)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 78 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei415 – 4151NucleophileUniRule annotation
    Active sitei468 – 4681Proton donorUniRule annotation

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

    Enzyme and pathway databases

    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
    Alternative name(s):
    1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
    Alpha-(1->4)-glucan branching enzymeUniRule annotation
    Glycogen branching enzymeUniRule annotation
    Short name:
    BEUniRule annotation
    Gene namesi
    Name:glgBUniRule annotation
    Ordered Locus Names:RB2638
    OrganismiRhodopirellula baltica (strain SH1)
    Taxonomic identifieri243090 [NCBI]
    Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
    ProteomesiUP000001025: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7367361,4-alpha-glucan branching enzyme GlgBPRO_0000188736Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi243090.RB2638.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7UVH1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000283037.
    KOiK00700.
    OMAiAKLLFMG.
    OrthoDBiEOG6JX7GT.

    Family and domain databases

    Gene3Di2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPiMF_00685. GlgB.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q7UVH1-1 [UniParc]FASTAAdd to Basket

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    MNSQLSLSTI QSLVDGSVAN PGSLLGRHPV NYRGREATSV RVLEPNAESV    50
    WLIDSASGLR RPMRRLHPGG FFEAICDEPI TKPSTSRLQM IDKTGKEIKT 100
    TSPYTVPSIF SDLDRYLIGE GRHNQLYERL GAQLREVDGV KGVNFAVWAP 150
    NARSVQVVGD FNGWDGRGHV AQPVESTGIW ELFLPGATVG QKYKFRIQTQ 200
    HGHWMDKCDP MAFAAELPPL TANIITDINT YSWNDSDWLQ QRAEMDPMHT 250
    PMNVYEVHLG SWQKGPGRTH GWLDYRDLAK RLVDYCHRMN FTHVELMPIS 300
    EHPFTGSWGY QSVGYYAPTS RHGSPEDFMF FVDHMHQNGI GVLIDWVPAH 350
    FPKDDHGLRQ FDGSALYEHA DPRQGEHPDW GTMIFNFGRN EVKNFLIANA 400
    LFWLDKYHID GLRVDAVASM LYLDYSREDG EWIPNRYGGR ENLESIDFLR 450
    DFNIAVHENH PGVITAAEES TAWPGVSRPT YDGGLGFTYK WNMGWMNDTL 500
    SYMRNEPIHR KFHQNELTFS LIYAFTENFT LPLSHDEVVH GKGSLISQMP 550
    GDMWQKFANL RLLYSYMWTH PGKKLLFMGG EIAQWTEWNA DDGPQWELLD 600
    FDTHRGVQQL VADLNKVVIE NPALHWHDFT GDGFEWIDAH NAEDSVLVYL 650
    RKGAEGDPPI LVCNNFTPVP RDNYRVGVPA QGFWKEIFNS DGEAYGGSNL 700
    GNYPGCQTTG IEHHARPDSI EVTLPPLGTT ILRLES 736
    Length:736
    Mass (Da):83,639
    Last modified:October 1, 2003 - v1
    Checksum:iADD83793F4B9327D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX294137 Genomic DNA. Translation: CAD72753.1.
    RefSeqiNP_865069.1. NC_005027.1.

    Genome annotation databases

    EnsemblBacteriaiCAD72753; CAD72753; RB2638.
    GeneIDi1793727.
    KEGGirba:RB2638.
    PATRICi23243849. VBIRhoBal59814_1210.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX294137 Genomic DNA. Translation: CAD72753.1 .
    RefSeqi NP_865069.1. NC_005027.1.

    3D structure databases

    ProteinModelPortali Q7UVH1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243090.RB2638.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAD72753 ; CAD72753 ; RB2638 .
    GeneIDi 1793727.
    KEGGi rba:RB2638.
    PATRICi 23243849. VBIRhoBal59814_1210.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000283037.
    KOi K00700.
    OMAi AKLLFMG.
    OrthoDBi EOG6JX7GT.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .

    Family and domain databases

    Gene3Di 2.60.40.10. 2 hits.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    HAMAPi MF_00685. GlgB.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 2 hits.
    TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SH1.

    Entry informationi

    Entry nameiGLGB_RHOBA
    AccessioniPrimary (citable) accession number: Q7UVH1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 10, 2005
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3