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Q7UTS2

- SPEA_RHOBA

UniProt

Q7UTS2 - SPEA_RHOBA

Protein

Biosynthetic arginine decarboxylase

Gene

speA

Organism
Rhodopirellula baltica (strain SH1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 67 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    Catalyzes the biosynthesis of agmatine from arginine.UniRule annotation

    Catalytic activityi

    L-arginine = agmatine + CO2.UniRule annotation

    Cofactori

    Magnesium.UniRule annotation
    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. arginine decarboxylase activity Source: UniProtKB-HAMAP
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. arginine catabolic process Source: InterPro
    2. spermidine biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Decarboxylase, Lyase

    Keywords - Biological processi

    Polyamine biosynthesis, Spermidine biosynthesis

    Keywords - Ligandi

    Magnesium, Metal-binding, Pyridoxal phosphate

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Biosynthetic arginine decarboxylaseUniRule annotation (EC:4.1.1.19UniRule annotation)
    Short name:
    ADCUniRule annotation
    Gene namesi
    Name:speAUniRule annotation
    Ordered Locus Names:RB3708
    OrganismiRhodopirellula baltica (strain SH1)
    Taxonomic identifieri243090 [NCBI]
    Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
    ProteomesiUP000001025: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 668668Biosynthetic arginine decarboxylasePRO_0000149974Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei105 – 1051N6-(pyridoxal phosphate)lysineUniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi243090.RB3708.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7UTS2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni286 – 29611Substrate-bindingUniRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1166.
    HOGENOMiHOG000029191.
    KOiK01585.
    OMAiIDHYVDG.
    OrthoDBiEOG676Z0R.

    Family and domain databases

    Gene3Di2.40.37.10. 2 hits.
    3.20.20.10. 1 hit.
    HAMAPiMF_01417. SpeA.
    InterProiIPR009006. Ala_racemase/Decarboxylase_C.
    IPR002985. Arg_decrbxlase.
    IPR022643. De-COase2_C.
    IPR022657. De-COase2_CS.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001336. Arg_decrbxlase. 1 hit.
    PRINTSiPR01180. ARGDCRBXLASE.
    PR01179. ODADCRBXLASE.
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    PROSITEiPS00878. ODR_DC_2_1. 1 hit.
    PS00879. ODR_DC_2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7UTS2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSSVLDSKWT RSDASKTYDI DRWGAGYFSI SDAGTVLVSP DRDPSQSIDL    50
    KELVDRLGQR NLDLPILLRF NGILRDRLRE LDRCFKNAIH DHKYQSRYRC 100
    VFPIKVNQQR EVVQQIVSEG ARLGFGIEAG SKPELVAAVA MGDANVPIVC 150
    NGFKDEEFIR LALLAQRLGR NVLPVVEKVS ELDLILDVAK DIGVRPTIGM 200
    RVKLATRGSG RWQASGGYRS KFGLTVAELL AQLDRLIAMD MGDCLQLLHF 250
    HVGSQIGNIR QLKSAILEAA RIYVDLVRRG AGMRYLDVGG GLGVDYDGSR 300
    SDSESSMNYT MQEYANDVVY HTQTVCDEAG VPHPELISES GRAVAAHHSV 350
    LVMETLGVTS QGVANLPCWA KVEGEPVSPD HGGIEMDSVG AIETSEMEGP 400
    PESYEQPVHD LWVGYVNMTQ ANMMETFHDA QVALDLCMNL FSGGYLPLEQ 450
    RVAAENLYFA ICHRVRELAE SMKERPDDLK HLDRMLSDIY FANFSLFQSM 500
    PDSWAIDQLF PIMPIHRLLE KPSRHAVLGD ITCDSDGKVD AFVCGGGRQR 550
    TLMLHPLKSG EPYQLAVFMV GAYQEILGDL HNLFGDTHAV HVDIEDGVTK 600
    VRSIVKGDTV SEVLGYVQYE DRELIENLQE SVESAIGNGH IDHQQAGETV 650
    AAYERALSGY TYLSTRTK 668
    Length:668
    Mass (Da):74,081
    Last modified:October 1, 2003 - v1
    Checksum:i3851560B071E60A9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX294139 Genomic DNA. Translation: CAD73363.1.
    RefSeqiNP_865678.1. NC_005027.1.

    Genome annotation databases

    EnsemblBacteriaiCAD73363; CAD73363; RB3708.
    GeneIDi1797121.
    KEGGirba:RB3708.
    PATRICi23244879. VBIRhoBal59814_1723.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX294139 Genomic DNA. Translation: CAD73363.1 .
    RefSeqi NP_865678.1. NC_005027.1.

    3D structure databases

    ProteinModelPortali Q7UTS2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 243090.RB3708.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAD73363 ; CAD73363 ; RB3708 .
    GeneIDi 1797121.
    KEGGi rba:RB3708.
    PATRICi 23244879. VBIRhoBal59814_1723.

    Phylogenomic databases

    eggNOGi COG1166.
    HOGENOMi HOG000029191.
    KOi K01585.
    OMAi IDHYVDG.
    OrthoDBi EOG676Z0R.

    Family and domain databases

    Gene3Di 2.40.37.10. 2 hits.
    3.20.20.10. 1 hit.
    HAMAPi MF_01417. SpeA.
    InterProi IPR009006. Ala_racemase/Decarboxylase_C.
    IPR002985. Arg_decrbxlase.
    IPR022643. De-COase2_C.
    IPR022657. De-COase2_CS.
    IPR022644. De-COase2_N.
    IPR022653. De-COase2_pyr-phos_BS.
    IPR000183. Orn/DAP/Arg_de-COase.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF02784. Orn_Arg_deC_N. 1 hit.
    PF00278. Orn_DAP_Arg_deC. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001336. Arg_decrbxlase. 1 hit.
    PRINTSi PR01180. ARGDCRBXLASE.
    PR01179. ODADCRBXLASE.
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    PROSITEi PS00878. ODR_DC_2_1. 1 hit.
    PS00879. ODR_DC_2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SH1.

    Entry informationi

    Entry nameiSPEA_RHOBA
    AccessioniPrimary (citable) accession number: Q7UTS2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 29, 2004
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3