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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei130 – 1301FAD; via amide nitrogen and carbonyl oxygenUniRule annotation
Binding sitei195 – 1951FADUniRule annotation
Binding sitei384 – 3841FADUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi18 – 236FADUniRule annotation
Nucleotide bindingi287 – 30115NADUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:RB9255
OrganismiRhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)
Taxonomic identifieri243090 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
Proteomesi
  • UP000001025 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 653653tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGPRO_0000117162Add
BLAST

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi243090.RB9255.

Structurei

3D structure databases

ProteinModelPortaliQ7ULV7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CWE. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201060.
InParanoidiQ7ULV7.
KOiK03495.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7ULV7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTANNPQNRY DYDVVVIGAG HAGTEAAAAA ARLGAKTALL TTNLDTVGQM
60 70 80 90 100
SCNPAIGGVA KGQIVREVDA LGGLMGEAID ATGIQFRMLN RRKGPAMHSP
110 120 130 140 150
RAQADKKAYQ NFIKYRIETQ DNLDLRQETV EDLITEPIAD GQDRLANQRV
160 170 180 190 200
IGVRVRGDAV YHAPTVILTT GTFLQAIMHT GKSQSAGGRA GEGTTAGLSG
210 220 230 240 250
ALKGMGFTLD RFKTGTPPRL NARTIDYSGL EEQPGDDDPQ PFSYLNDAIS
260 270 280 290 300
SPQMACHIAH TNERVHDLIR ANLDRAPMYS GQIDSRGPRY CPSIEDKVVR
310 320 330 340 350
FADKSSHQLF LEPEGRQTCE VYVNGISTSL PRDVQDAMFR CIPGLEKAAI
360 370 380 390 400
MRYGYAVEYD YCPPTQLWPH LESKSVSGLF FAGQINGTTG YEEAAGQGLI
410 420 430 440 450
AGLNAARTAA SKTPWVPSRQ DAYIGVLVDD LVTSGTDEPY RMFTSRAEYR
460 470 480 490 500
LLLRQDNADR RLTAQADELG LIDAARRERF HRKLAEIERG TELLQQAKFQ
510 520 530 540 550
PETGPTVRGD VYLRRPEVTW NVIAEQVPEL AGIGREAAEQ CSIDIKYAGY
560 570 580 590 600
IDRQQAEVHK QSRHAEKSIP VSFDYDKIGP LRNEAKEKLT KVRPLNLGQA
610 620 630 640 650
KRISGITPAD LALVLAHLEN NSLSQTKSSA SVDKRASSDN ESSRPTSSAS

DSL
Length:653
Mass (Da):71,391
Last modified:October 11, 2005 - v2
Checksum:i6415CDB109D4DF44
GO

Sequence cautioni

The sequence CAD76162 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX294149 Genomic DNA. Translation: CAD76162.1. Different initiation.
RefSeqiNP_868785.1. NC_005027.1.

Genome annotation databases

EnsemblBacteriaiCAD76162; CAD76162; RB9255.
GeneIDi1792294.
KEGGirba:RB9255.
PATRICi23250339. VBIRhoBal59814_4432.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX294149 Genomic DNA. Translation: CAD76162.1. Different initiation.
RefSeqiNP_868785.1. NC_005027.1.

3D structure databases

ProteinModelPortaliQ7ULV7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243090.RB9255.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAD76162; CAD76162; RB9255.
GeneIDi1792294.
KEGGirba:RB9255.
PATRICi23250339. VBIRhoBal59814_4432.

Phylogenomic databases

eggNOGiENOG4105CWE. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201060.
InParanoidiQ7ULV7.
KOiK03495.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMNMG_RHOBA
AccessioniPrimary (citable) accession number: Q7ULV7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 11, 2005
Last sequence update: October 11, 2005
Last modified: September 7, 2016
This is version 78 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.