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Q7UIA4 (PYRF_RHOBA) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Orotidine 5'-phosphate decarboxylase

EC=4.1.1.23
Alternative name(s):
OMP decarboxylase
Short name=OMPDCase
Short name=OMPdecase
Gene names
Name:pyrF
Ordered Locus Names:RB12661
OrganismRhodopirellula baltica (strain SH1) [Reference proteome] [HAMAP]
Taxonomic identifier243090 [NCBI]
Taxonomic lineageBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula

Protein attributes

Sequence length302 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 302302Orotidine 5'-phosphate decarboxylase HAMAP-Rule MF_01215
PRO_0000227023

Sites

Active site1051Proton donor By similarity

Sequences

Sequence LengthMass (Da)Tools
Q7UIA4 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: F5A7B44C039B7C57

FASTA30231,904
        10         20         30         40         50         60 
MMTFATQLNA AILRTGSVTC VGLDPRLEQL PKPLRDSVSE KRKDSVAAAY TQFCCEIIDA 

        70         80         90        100        110        120 
VAGLVPCVKP QAAFFEQLGP AGMVSLGEVI SHANQAGLIV ITDGKRNDIG STATAYADAY 

       130        140        150        160        170        180 
LGSAEPDRSP WGSDALTVSP YLGRDSLEPF VEVCDRRAAG IFVLVKTSNP GGGYLQDLSV 

       190        200        210        220        230        240 
DGKTIYQSVA ELVTELNKSR LDADGYGPVG AVVGATYPEQ LVELRKAMPH SILLVPGFGA 

       250        260        270        280        290        300 
QGGSADDVRA AMDANGAGAV VNSSRHIVFA HKREEFSVAA DESNWQDAVR AATIQMNEQL 


KG 

« Hide

References

[1]"Complete genome sequence of the marine planctomycete Pirellula sp. strain 1."
Gloeckner F.O., Kube M., Bauer M., Teeling H., Lombardot T., Ludwig W., Gade D., Beck A., Borzym K., Heitmann K., Rabus R., Schlesner H., Amann R., Reinhardt R.
Proc. Natl. Acad. Sci. U.S.A. 100:8298-8303(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SH1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX294155 Genomic DNA. Translation: CAD77710.1.
RefSeqNP_870633.1. NC_005027.1.

3D structure databases

ProteinModelPortalQ7UIA4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243090.RB12661.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAD77710; CAD77710; RB12661.
GeneID1790129.
KEGGrba:RB12661.
PATRIC23253825. VBIRhoBal59814_6141.

Phylogenomic databases

eggNOGCOG0284.
HOGENOMHOG000245747.
KOK01591.
OMACRTSNAG.
OrthoDBEOG6DZF33.

Enzyme and pathway databases

UniPathwayUPA00070; UER00120.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
HAMAPMF_01215. OMPdecase_type2.
InterProIPR013785. Aldolase_TIM.
IPR018089. OMPdecase_AS.
IPR011995. OMPdecase_type-2.
IPR001754. OMPdeCOase_dom.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
PfamPF00215. OMPdecase. 1 hit.
[Graphical view]
SMARTSM00934. OMPdecase. 1 hit.
[Graphical view]
SUPFAMSSF51366. SSF51366. 1 hit.
TIGRFAMsTIGR02127. pyrF_sub2. 1 hit.
PROSITEPS00156. OMPDECASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePYRF_RHOBA
AccessionPrimary (citable) accession number: Q7UIA4
Entry history
Integrated into UniProtKB/Swiss-Prot: March 7, 2006
Last sequence update: October 1, 2003
Last modified: May 14, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways