Q7UH30 (Q7UH30_RHOBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysine--tRNA ligase genX EMBL CAD78149.1
EC=6.1.1.6 EMBL CAD78149.1

Gene names

Ordered Locus Names:

RB4877

Organism

Rhodopirellula baltica (strain SH1)

Taxonomic identifier

243090 [NCBI]

Taxonomic lineage

Bacteria › Planctomycetes › Planctomycetacia › Planctomycetales › Planctomycetaceae › Rhodopirellula

Protein attributes

Sequence length	394 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7UH30 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: D7C29C4D1C06389D	FASTA	394	43,350
	10 20 30 40 50 60 MTGWKTLALS IFLAVGSPLP SPASLVRLSS MPDPSAFSSE IDADSVREVT AAGLLRGNQQ 70 80 90 100 110 120 GKNTTRSEMN ASSKPSLAVR LRQRAEMLRE IRRFFDDRGF IEVQPPCLSR DCVVDAFLDP 130 140 150 160 170 180 IEVESSQVGL FGELDSPTKF YLQTSPESAM KRLLAEGAPS IYAITPVFRK GETGARHNVE 190 200 210 220 230 240 FSMLEWYEVG GDAASAIELL GNLAVEVLQS PSFKTVTYRD AFAKHLGFDP IEVPIVDLHG 250 260 270 280 290 300 LVDEMDSSLA ESIGLDRDAL LDVLLSERIE PVFANDTPTI LTRYPLTQAA LAKPCQDDPQ 310 320 330 340 350 360 CAERFELFYR GVELANGYDE LLDADELKKR YEHNNQIRMA HGRPALAVET TLLRAMRQGL 370 380 390 PACSGVALGI DRLLMLRVDA HSIEDVVPLP TTRA

References

[1]

"Complete genome sequence of the marine planctomycete Pirellula sp. strain 1." Gloeckner F.O., Kube M., Bauer M., Teeling H., Lombardot T., Ludwig W., Gade D., Beck A., Borzym K., Heitmann K., Rabus R., Schlesner H., Amann R., Reinhardt R. Proc. Natl. Acad. Sci. U.S.A. 100:8298-8303(2003) [PubMed: 12835416] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SH1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX294141 Genomic DNA. Translation: CAD78149.1.
RefSeq	NP_866368.1. NC_005027.1.
3D structure databases
HSSP	HSSP built from PDB template 1BBW based on UniProtKB P13030.
ProteinModelPortal	Q7UH30.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1794117.
GenomeReviews	Gene locus RB4877 in contig BX119912_GR.
KEGG	rba:RB4877.
NMPDR	fig|243090.1.peg.2708.
PATRIC	23246067. VBIRhoBal59814_2314.
Phylogenomic databases
HOGENOM	HBG631383.
OMA	MPEASGI.
PhylomeDB	Q7UH30.
Enzyme and pathway databases
BioCyc	PSP117:RB4877-MONOMER.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7UH30_RHOBA

Accession

Primary (citable) accession number: Q7UH30

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	December 14, 2011
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)