Q7U9R9 (Q7U9R9_SYNPX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative CTP:CMP-3-deoxy-D-manno-octulosonate transferase EMBL CAE06699.1
EC=2.7.7.38 EMBL CAE06699.1

Gene names

Name:	kdsB2 EMBL CAE06699.1
Ordered Locus Names:	SYNW0184

Organism

Synechococcus sp. (strain WH8102) [Complete proteome] [HAMAP]

Taxonomic identifier

84588 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	259 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria By similarity. SAAS SAAS004528
Catalytic activity	CTP + 3-deoxy-D-manno-octulosonate = diphosphate + CMP-3-deoxy-D-manno-octulosonate. SAAS SAAS004528
Pathway	Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. SAAS SAAS004528 Nucleotide-sugar biosynthesis; CMP-3-deoxy-D-manno-octulosonate biosynthesis; CMP-3-deoxy-D-manno-octulosonate from 3-deoxy-D-manno-octulosonate and CTP: step 1/1. SAAS SAAS004528
Subcellular location	Cytoplasm By similarity SAAS SAAS004528.

Ontologies

Keywords
Biological process	Lipopolysaccharide biosynthesis SAAS SAAS004528
Cellular component	Cytoplasm SAAS SAAS004528
Molecular function	Nucleotidyltransferase SAAS SAAS004528 EMBL CAE06699.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3-deoxy-manno-octulosonate cytidylyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7U9R9 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: A48E6FC423750B03	FASTA	259	28,212
	10 20 30 40 50 60 MAIQQAVVAV PARLQSSRLP NKVLAEIGGK PMIQRVLERC REASTVQAVV LCTDSSQLQQ 70 80 90 100 110 120 LAEGWGFPVL MTSSDCSSGS ERIASVADQL MALAWREGPA VAEQTAVINV QGDQPFIDPA 130 140 150 160 170 180 VIDAMVAEFQ RLDPVPAVVT PVYGLSPETI HNPNVVKTLL AHDGRALYFS RSAIPHVRDV 190 200 210 220 230 240 DPTDWHRHTT YWGHVGMYGF RGDVLAAWDQ LPASPLEDLE RLEQLRLIEA GHTIATFPVA 250 GTSLSVDTAE QLEQARSMV

References

[1]

"The genome of a motile marine Synechococcus." Palenik B., Brahamsha B., Larimer F.W., Land M.L., Hauser L., Chain P., Lamerdin J.E., Regala W., Allen E.E., McCarren J., Paulsen I.T., Dufresne A., Partensky F., Webb E.A., Waterbury J. Nature 424:1037-1042(2003) [PubMed: 12917641] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX569689 Genomic DNA. Translation: CAE06699.1.
RefSeq	NP_896279.1. NC_005070.1.
3D structure databases
HSSP	HSSP built from PDB template 1VH1 based on UniProtKB P04951.
ProteinModelPortal	Q7U9R9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q7U9R9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1730508.
GenomeReviews	Gene locus SYNW0184 in contig BX548020_GR.
KEGG	syw:SYNW0184.
PATRIC	23831743. VBISynSp27240_0186.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1212.
HOGENOM	HBG637773.
OMA	INVQADE.
PhylomeDB	Q7U9R9.
ProtClustDB	PRK05450.
Enzyme and pathway databases
BioCyc	SSP84588:SYNW0184OR1239-MONOMER.
Family and domain databases
InterPro	IPR003329. Cytidylyl_trans. IPR004528. KdsB. [Graphical view]
KO	K00979.
PANTHER	PTHR21485:SF4. PTHR21485:SF4. 1 hit.
Pfam	PF02348. CTP_transf_3. 1 hit. [Graphical view]
TIGRFAMs	TIGR00466. KdsB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q7U9R9_SYNPX

Accession

Primary (citable) accession number: Q7U9R9

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)