Q7U8K8 (RPIA_SYNPX) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A
EC=5.3.1.6

Alternative name(s):
Phosphoriboisomerase A
Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	SYNW0609

Organism

Synechococcus sp. (strain WH8102) [Complete proteome] [HAMAP]

Taxonomic identifier

84588 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	239 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 239	239	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_0000158484

Sequences

	Sequence		Length	Mass (Da)
	Q7U8K8 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 0CBB3F22E5E784DA	FASTA	239	24,888
	10 20 30 40 50 60 MADLQTQMKQ AVADAAVEQI KDGMVLGLGS GSTAALMIKA LGAKLASGEL KDIVGVTTSF 70 80 90 100 110 120 QGEVLAAELN IPLLSLNAVD RIDLAIDGAD EVDPGFQLIK GGGACHVQEK LVAARADRFV 130 140 150 160 170 180 VVVDSTKLVE RLNLGFLLPV EVLPGAWRQV QQQLAALGGK AELRMAQRKA GPVVTDQGNL 190 200 210 220 230 VLDVTMNGGI SDPAALESTV NNIPGVLENG LFVDLVDEVL VGEITDGSAG VRSLEKRLS

References

[1]

"The genome of a motile marine Synechococcus." Palenik B., Brahamsha B., Larimer F.W., Land M.L., Hauser L., Chain P., Lamerdin J.E., Regala W., Allen E.E., McCarren J., Paulsen I.T., Dufresne A., Partensky F., Webb E.A., Waterbury J. Nature 424:1037-1042(2003) [PubMed: 12917641] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: WH8102.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX569690 Genomic DNA. Translation: CAE07124.1.
RefSeq	NP_896702.1. NC_005070.1.
3D structure databases
ProteinModelPortal	Q7U8K8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q7U8K8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1732359.
GenomeReviews	Gene locus SYNW0609 in contig BX548020_GR.
KEGG	syw:SYNW0609.
PATRIC	23832639. VBISynSp27240_0628.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HBG515603.
OMA	NLSLYVD.
PhylomeDB	Q7U8K8.
ProtClustDB	PRK00702.
Enzyme and pathway databases
BioCyc	SSP84588:SYNW0609OR1539-MONOMER.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. IPR014036. Tscrpt_reg_HTH_DeoR. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF00455. DeoR. 1 hit. PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_SYNPX

Accession

Primary (citable) accession number: Q7U8K8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 16, 2004
Last sequence update:	October 1, 2003
Last modified:	January 25, 2012
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program