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Protein

Glycogen synthase

Gene

glgA

Organism
Synechococcus sp. (strain WH8102)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:SYNW1000
OrganismiSynechococcus sp. (strain WH8102)
Taxonomic identifieri84588 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001422: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 513513Glycogen synthasePRO_0000188654Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi84588.SYNW1000.

Structurei

3D structure databases

ProteinModelPortaliQ7U7I2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPVWMHQD.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7U7I2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRILFAAAEC APMIKVGGMG DVVGSLPPAL AKLGHDVRLI MPGYSKLWTK
60 70 80 90 100
LTISDEPIWR AQTMGTEFAV YETKHPGNGM TIYLVGHPVF DPERIYGGED
110 120 130 140 150
EDWRFTFFAS AAAEFAWNVW KPNVLHCHDW HTGMIPVWMH QDPEISTVFT
160 170 180 190 200
IHNLKYQGPW RWKLDRITWC PWYMQGDHTM AAALLYADRV NAVSPTYAEE
210 220 230 240 250
IRTAEYGEKL DGLLNFVSGK LRGILNGIDL EAWNPQTDGA LPATFSADDL
260 270 280 290 300
SGKAVCKRVL QERMGLEVRD DAFVLGMVSR LVDQKGVDLL LQVADRLLAY
310 320 330 340 350
TDTQIVVLGT GDRGLESGLW QLASRHAGRC AVFLTYDDDL SRLIYAGSDA
360 370 380 390 400
FLMPSRFEPC GISQLYAMRY GSVPVVRKVG GLVDTVPPHS PADASGTGFC
410 420 430 440 450
FDRFEPVDFY TALVRAWEAY RHRDSWQELQ KRGMQQDYSW DRSAIDYDVM
460 470 480 490 500
YRDVCGLKEP TPDAAMVEQF SQGQAADPSR PEDDAINAAP EAVTAPSGPS
510
RNPLNRLFGR RAD
Length:513
Mass (Da):57,389
Last modified:October 1, 2003 - v1
Checksum:i0FED71111146F218
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX569691 Genomic DNA. Translation: CAE07515.1.
RefSeqiNP_897093.1. NC_005070.1.
WP_011127865.1. NC_005070.1.

Genome annotation databases

EnsemblBacteriaiCAE07515; CAE07515; SYNW1000.
GeneIDi1730385.
KEGGisyw:SYNW1000.
PATRICi23833473. VBISynSp27240_1041.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX569691 Genomic DNA. Translation: CAE07515.1.
RefSeqiNP_897093.1. NC_005070.1.
WP_011127865.1. NC_005070.1.

3D structure databases

ProteinModelPortaliQ7U7I2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi84588.SYNW1000.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE07515; CAE07515; SYNW1000.
GeneIDi1730385.
KEGGisyw:SYNW1000.
PATRICi23833473. VBISynSp27240_1041.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPVWMHQD.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WH8102.

Entry informationi

Entry nameiGLGA_SYNPX
AccessioniPrimary (citable) accession number: Q7U7I2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: October 1, 2003
Last modified: January 7, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.