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Q7U6L7

- Q7U6L7_SYNPX

UniProt

Q7U6L7 - Q7U6L7_SYNPX

Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

SYNW1321

Organism
Synechococcus sp. (strain WH8102)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:SYNW1321Imported
    OrganismiSynechococcus sp. (strain WH8102)Imported
    Taxonomic identifieri84588 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001422: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi84588.SYNW1321.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7U6L7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7U6L7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAFQALFDR LDRMNGTNAK VRALAEHFRS TPAADGAWAL QLLLGKRRRR    50
    LITGRRLRDI LRDRGGLPEW LIADCHGQVG DSAETISLLW PAVKDRIQGQ 100
    ATDLPSINPE QPLHWWMETL LPAIGALKDD KQADAVIHLW HAVPDERHFI 150
    VNKLLTGGFR VGVSTGLISR ALATAFELED TLVVQRLMGG FTPSAAAFLA 200
    LSRPEAPEEQ QSSGVPYPFF LASPLEPERL VETPASDWRV EWKWDGIRGQ 250
    LIHRGTGVYL WSRGEELVND SFPELVDVAA ALPQGTVLDG EVICWREGDE 300
    TPLGFDQLQR RLGRKTVGST LKRECPMRFV AYDLLERSGT DIRQRPLHER 350
    QHQLDDVLNH VDHGEAWRLH RSPSWVLQSW GELDQQRNNA REVRAEGLML 400
    KNIDSPYLSG RKRGHWWKHK LEPMTLDAVL LYAQAGSGRR ANLFTDYTFG 450
    LWSDAAEPQL VSFAKAYSGL NDEEILELDR WIRRNTLQRF GPARSVKAEL 500
    VFEIGFEGIH PSKRHKSGIA VRFPRILRWR RDKPADEADR IQTALSLIRD 550
    QPEASL 556
    Length:556
    Mass (Da):63,169
    Last modified:October 1, 2003 - v1
    Checksum:i03C4D9E9F7479B72
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX569692 Genomic DNA. Translation: CAE07836.1.
    RefSeqiNP_897414.1. NC_005070.1.
    WP_011128185.1. NC_005070.1.

    Genome annotation databases

    EnsemblBacteriaiCAE07836; CAE07836; SYNW1321.
    GeneIDi1730074.
    KEGGisyw:SYNW1321.
    PATRICi23834178. VBISynSp27240_1389.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BX569692 Genomic DNA. Translation: CAE07836.1 .
    RefSeqi NP_897414.1. NC_005070.1.
    WP_011128185.1. NC_005070.1.

    3D structure databases

    ProteinModelPortali Q7U6L7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 84588.SYNW1321.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAE07836 ; CAE07836 ; SYNW1321 .
    GeneIDi 1730074.
    KEGGi syw:SYNW1321.
    PATRICi 23834178. VBISynSp27240_1389.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: WH8102Imported.

    Entry informationi

    Entry nameiQ7U6L7_SYNPX
    AccessioniPrimary (citable) accession number: Q7U6L7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2003
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3