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Q7U6L7

- Q7U6L7_SYNPX

UniProt

Q7U6L7 - Q7U6L7_SYNPX

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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene
SYNW1321
Organism
Synechococcus sp. (strain WH8102)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:SYNW1321Imported
OrganismiSynechococcus sp. (strain WH8102)Imported
Taxonomic identifieri84588 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001422: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi84588.SYNW1321.

Structurei

3D structure databases

ProteinModelPortaliQ7U6L7.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7U6L7-1 [UniParc]FASTAAdd to Basket

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MKAFQALFDR LDRMNGTNAK VRALAEHFRS TPAADGAWAL QLLLGKRRRR    50
LITGRRLRDI LRDRGGLPEW LIADCHGQVG DSAETISLLW PAVKDRIQGQ 100
ATDLPSINPE QPLHWWMETL LPAIGALKDD KQADAVIHLW HAVPDERHFI 150
VNKLLTGGFR VGVSTGLISR ALATAFELED TLVVQRLMGG FTPSAAAFLA 200
LSRPEAPEEQ QSSGVPYPFF LASPLEPERL VETPASDWRV EWKWDGIRGQ 250
LIHRGTGVYL WSRGEELVND SFPELVDVAA ALPQGTVLDG EVICWREGDE 300
TPLGFDQLQR RLGRKTVGST LKRECPMRFV AYDLLERSGT DIRQRPLHER 350
QHQLDDVLNH VDHGEAWRLH RSPSWVLQSW GELDQQRNNA REVRAEGLML 400
KNIDSPYLSG RKRGHWWKHK LEPMTLDAVL LYAQAGSGRR ANLFTDYTFG 450
LWSDAAEPQL VSFAKAYSGL NDEEILELDR WIRRNTLQRF GPARSVKAEL 500
VFEIGFEGIH PSKRHKSGIA VRFPRILRWR RDKPADEADR IQTALSLIRD 550
QPEASL 556
Length:556
Mass (Da):63,169
Last modified:October 1, 2003 - v1
Checksum:i03C4D9E9F7479B72
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX569692 Genomic DNA. Translation: CAE07836.1.
RefSeqiNP_897414.1. NC_005070.1.
WP_011128185.1. NC_005070.1.

Genome annotation databases

EnsemblBacteriaiCAE07836; CAE07836; SYNW1321.
GeneIDi1730074.
KEGGisyw:SYNW1321.
PATRICi23834178. VBISynSp27240_1389.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX569692 Genomic DNA. Translation: CAE07836.1 .
RefSeqi NP_897414.1. NC_005070.1.
WP_011128185.1. NC_005070.1.

3D structure databases

ProteinModelPortali Q7U6L7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 84588.SYNW1321.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAE07836 ; CAE07836 ; SYNW1321 .
GeneIDi 1730074.
KEGGi syw:SYNW1321.
PATRICi 23834178. VBISynSp27240_1389.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WH8102.

Entry informationi

Entry nameiQ7U6L7_SYNPX
AccessioniPrimary (citable) accession number: Q7U6L7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: September 3, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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