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Protein
Submitted name:

Synechococcus sp. WH8102 complete genome; segment 6/7

Gene

SYNW1955

Organism
Synechococcus sp. (strain WH8102)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. maltose alpha-D-glucosyltransferase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Synechococcus sp. WH8102 complete genome; segment 6/7Imported (EC:5.4.99.16Imported)
Gene namesi
Ordered Locus Names:SYNW1955Imported
OrganismiSynechococcus sp. (strain WH8102)Imported
Taxonomic identifieri84588 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001422 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi84588.SYNW1955.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220639.
KOiK05343.
OMAiRMKANIG.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

Q7U4V8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQTMPWWTG TVIYQLIVRS FADGNGDGIG DFKGLASRLP YLRWLGVKTL
60 70 80 90 100
WLTPTYPSPL RDGGYDITDF KDIHPDLGDL ASFHRFLTAA HSQGMRVILD
110 120 130 140 150
LVLNHTSDLH PWFQRARWAP KGSTERDVYV WSDDPSRYSD APVLFRHFEA
160 170 180 190 200
SNWEWDPVAE QYYLHRFLSH QPDLNYANPW VQEAMLEVVD FWLERGVDGF
210 220 230 240 250
RLDAVPFLFE EEGTRCEGLP ETHAFLRRLR ARVDAMGREV LLLGEAIQPV
260 270 280 290 300
QEAAPYLAKD ELHGAFNFVL TAHLFAAVAS GSTRQLGDCL NEAEHAVDGP
310 320 330 340 350
RWALPLRNHD ELWLGDGHLI PDEVIQSIRV GLPQGQGHWL NWGINRRLAP
360 370 380 390 400
LLNGDPRSNR LLHGLIYSLP GMPCLYYGDE LGMGDWPGLR DRDPNRTPMA
410 420 430 440 450
WTPARNGGFS SAPDPLLVLP PITAPGYDYR VVNVEVQKQL PGSLLNWHRR
460 470 480 490 500
MLTCRRLLPA LAHGSLQLLP CSHPGALVYV RATEAMTVLV AGNVTAAGAS
510 520 530 540 550
FSLDLTAWEG LRTREVMWGC EFPLASREWF VNLSPYGINW WLIGEVDTAV

PVS
Length:553
Mass (Da):62,335
Last modified:October 1, 2003 - v1
Checksum:i25590E939E405919
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX569694 Genomic DNA. Translation: CAE08470.1.
RefSeqiNP_898046.1. NC_005070.1.
WP_011128813.1. NC_005070.1.

Genome annotation databases

EnsemblBacteriaiCAE08470; CAE08470; SYNW1955.
KEGGisyw:SYNW1955.
PATRICi23835603. VBISynSp27240_2090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX569694 Genomic DNA. Translation: CAE08470.1.
RefSeqiNP_898046.1. NC_005070.1.
WP_011128813.1. NC_005070.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi84588.SYNW1955.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE08470; CAE08470; SYNW1955.
KEGGisyw:SYNW1955.
PATRICi23835603. VBISynSp27240_2090.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000220639.
KOiK05343.
OMAiRMKANIG.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: WH8102Imported.

Entry informationi

Entry nameiQ7U4V8_SYNPX
AccessioniPrimary (citable) accession number: Q7U4V8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 29, 2015
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.