Reviewed, UniProtKB/Swiss-Prot Q7U358 (CCA_BORPE)

Names and origin

Protein names

Recommended name:
    CCA-adding enzyme
    EC=2.7.7.25
    EC=2.7.7.21
Alternative name(s):
    tRNA nucleotidyltransferase
    tRNA adenylyl-/cytidylyl- transferase
    tRNA CCA-pyrophosphorylase
    tRNA-NT

Gene names

Name:	cca
Ordered Locus Names:	BP3059

Organism

Bordetella pertussis [Complete proteome] [HAMAP]

Taxonomic identifier

520 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	364 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate By similarity.
Catalytic activity	ATP + tRNA(n) = diphosphate + tRNA(n+1). HAMAP MF_01262 CTP + tRNA(n) = diphosphate + tRNA(n+1). HAMAP MF_01262
Cofactor	Magnesium By similarity.
Miscellaneous	A single active site specifically recognizes both ATP and CTP and is responsible for their addition By similarity.
Sequence similarities	Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 2 subfamily.

Ontologies

Keywords
Biological process	RNA repair tRNA processing
Ligand	ATP-binding Magnesium Metal-binding Nucleotide-binding RNA-binding
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA repair Inferred from electronic annotation. Source: UniProtKB-KW tRNA 3'-terminal CCA addition Inferred from electronic annotation. Source: HAMAP
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP magnesium ion binding Inferred from electronic annotation. Source: HAMAP tRNA adenylyltransferase activity Inferred from electronic annotation. Source: HAMAP tRNA binding Inferred from electronic annotation. Source: HAMAP tRNA cytidylyltransferase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 364	364	CCA-adding enzyme HAMAP MF_01262		PRO_0000139016
Sites
	Metal binding	32	1	Magnesium By similarity
	Metal binding	34	1	Magnesium By similarity
	Binding site	19	1	ATP or CTP; via amide nitrogen By similarity
	Binding site	22	1	ATP or CTP By similarity
	Binding site	102	1	ATP or CTP By similarity
	Binding site	148	1	ATP or CTP By similarity
	Binding site	151	1	ATP or CTP By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q7U358-1 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: B607EA021D20698D	FASTA	364	39,427
	10 20 30 40 50 60 MSRTDDPGVA GLRVYIVGGA VRDDLLGLPA GDRDWVVVGA TPEDMARRGF IPVGGDFPVF 70 80 90 100 110 120 LHPRTKEEYA LARTERKSGR GYKGFTFYTG ADVTLEQDLQ RRDLTVNAIA RTPQGELVDP 130 140 150 160 170 180 LDGVADVRAR VLRHVGEAFA EDPVRILRLG RFAARFGDFS IAPETMQLCR RMVEAGEADA 190 200 210 220 230 240 LVPERVWKEV SRGLMAQAPS RMLDVLARAG ALARVMPELH DDTAVRAEID RAAAAGLPLA 250 260 270 280 290 300 GRYALLCRHT PERDALGRRL RAPVECMDQA RLLPLAVDAL AASATPAAQL DLIERCDALR 310 320 330 340 350 360 KPERFDALLQ AAAIVAPVDL SAWRARVQAV RAIDAGAIAR QCAGDPARIK PALRQARLQA LGGA

References

[1]

"Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica." Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S. , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. Nat. Genet. 35:32-40(2003) [PubMed: 12910271] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tohama I / ATCC BAA-589 / NCTC 13251.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BX640420 Genomic DNA. Translation: CAE43328.1.
RefSeq	NP_881630.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	2666541.
GenomeReviews	Gene locus BP3059 in contig BX470248_GR.
KEGG	bpe:BP3059.
NMPDR	fig|257313.1.peg.2702.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q7U358.
OMA	Q7U358. ARQCAGD.
Enzyme and pathway databases
BioCyc	BPER257313:BP3059-MON.
BRENDA	2.7.7.21. 21511. 2.7.7.25. 21511.
Family and domain databases
HAMAP	MF_01262. [Tree]
InterPro	IPR012006. CCA_bact. IPR002646. PolyA_pol_reg. [Graphical view]
Pfam	PF01743. PolyA_pol. 1 hit. [Graphical view]
PIRSF	PIRSF000813. CCA_bact. 1 hit.
ProtoNet	Search...

Entry information

Entry name

CCA_BORPE

Accession

Primary (citable) accession number: Q7U358

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 16, 2005
Last sequence update:	October 1, 2003
Last modified:	June 16, 2009
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)