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Protein
Submitted name:

Uncharacterized protein

Gene

BB2225

Organism
Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBBRO257310:BB2225-MONOMER.
BBRO257310:BB3495-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:BB2225Imported, BB3495Imported
OrganismiBordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus)Imported
Taxonomic identifieri257310 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
ProteomesiUP000001027 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi257310.BB3495.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2L25NMR-A1-140[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ7TTM0.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000219491.
OMAiHKIIRSL.
OrthoDBiEOG6FRCZ7.

Family and domain databases

InterProiIPR025395. DUF4128.
[Graphical view]
PfamiPF13554. DUF4128. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7TTM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQDLIRAAF EKRLSDWAKA RTPALPVAWQ NTKFTPPAAG VYLRAYVMPA
60 70 80 90 100
ATISRDAAGD HRQYRGVFQV NVVMPIGDGS RSAEQVAAEL DALFPVNLVM
110 120 130 140
QSGGLAVRVR TPISNGQPTT GDADHTVPIS LGYDVQFYPE
Length:140
Mass (Da):15,188
Last modified:October 1, 2003 - v1
Checksum:i1D9E8DEEDB0266FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640443 Genomic DNA. Translation: CAE32722.1.
BX640447 Genomic DNA. Translation: CAE33988.1.
RefSeqiNP_888769.1. NC_002927.3.
NP_890029.1. NC_002927.3.

Genome annotation databases

EnsemblBacteriaiCAE32722; CAE32722; BB2225.
CAE33988; CAE33988; BB3495.
KEGGibbr:BB2225.
bbr:BB3495.
PATRICi21137767. VBIBorBro124907_2253.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX640443 Genomic DNA. Translation: CAE32722.1.
BX640447 Genomic DNA. Translation: CAE33988.1.
RefSeqiNP_888769.1. NC_002927.3.
NP_890029.1. NC_002927.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2L25NMR-A1-140[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi257310.BB3495.

Protocols and materials databases

DNASUi2662182.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE32722; CAE32722; BB2225.
CAE33988; CAE33988; BB3495.
KEGGibbr:BB2225.
bbr:BB3495.
PATRICi21137767. VBIBorBro124907_2253.

Phylogenomic databases

HOGENOMiHOG000219491.
OMAiHKIIRSL.
OrthoDBiEOG6FRCZ7.

Enzyme and pathway databases

BioCyciBBRO257310:BB2225-MONOMER.
BBRO257310:BB3495-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ7TTM0.

Family and domain databases

InterProiIPR025395. DUF4128.
[Graphical view]
PfamiPF13554. DUF4128. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
    Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
    , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
    Nat. Genet. 35:0-0(2003)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RB50Imported.
  2. "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."
    Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E., Holden M.T., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A., Achtman M., Atkin R., Baker S.
    , Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J.
    Nat. Genet. 35:32-40(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-588 / NCTC 13252 / RB50Imported.
  3. "NMR structure of protein NP_888769.1, a phage-related protein in the Bordetella bronchiseptica genome."
    Wahab A., Serrano P., Geralt M., Wuthrich K.
    Submitted (AUG-2010) to the PDB data bank
    Cited for: STRUCTURE BY NMR.

Entry informationi

Entry nameiQ7TTM0_BORBR
AccessioniPrimary (citable) accession number: Q7TTM0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 1, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.