Unreviewed, UniProtKB/TrEMBL Q7TSY1 (Q7TSY1_MOUSE)

Names and origin

Protein names

Submitted name:
    PPARdelta EMBL AAP37029.1

Gene names

Name:

Ppard MGI 101884

Organism

Mus musculus (Mouse) EMBL AAP37029.1

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

Protein attributes

Sequence length	143 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the nuclear hormone receptor family. Contains 1 nuclear receptor DNA-binding domain.

Ontologies

Keywords
Biological process	Transcription Transcription regulation Spearmint SPM000324
Cellular component	Nucleus Spearmint SPM000324
Ligand	DNA-binding Spearmint SPM000324 Metal-binding Spearmint SPM000324 Zinc Spearmint SPM000324
Gene Ontology (GO)
Biological process	apoptosis Inferred from electronic annotation. Source: Compara regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro transcription Inferred from electronic annotation. Source: UniProtKB-KW vitamin A metabolic process Inferred from electronic annotation. Source: Compara
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	NF-kappaB binding Inferred from electronic annotation. Source: Compara drug binding Inferred from electronic annotation. Source: Compara fatty acid binding Inferred from electronic annotation. Source: Compara ligand-dependent nuclear receptor activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAP37029.1
	Non-terminal residue	143	1	EMBL AAP37029.1

Sequences

	Sequence		Length	Mass (Da)
	Q7TSY1-1 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 9F6A126BCF66FBF3	FASTA	143	15,828
	10 20 30 40 50 60 EEKEEVATGD GAPELNGGPE HTLPSSSCTD LSQNSSPSSL LDQLQMGCDG ASGGSLNMEC 70 80 90 100 110 120 RVCGDKASGF HYGVHACEGC KGFFRRTIRM KLKYEKCDRI CKIQKKNRNK CQYCRFQKCL 130 140 ALGMSHNAIR FGRMPEAEKR KLV

References

[1]	"Expression of PGIS and PGI2 receptor mRNA in mouse preimplantation embryos." Ding N.-Z., He C.-Q., Yang Z.-M. Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Kunming EMBL AAP37029.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY283201 mRNA. Translation: AAP37029.1.
IPI	IPI00271799.
UniGene	Mm.328914
3D structure databases
HSSP	HSSP built from PDB template 1HCQ based on UniProtKB P03372.
SMR	Q7TSY1. Positions 51-137.
ModBase	Search...
Protein-protein interaction databases
STRING	Q7TSY1.
Genome annotation databases
Ensembl	ENSMUST00000002320; ENSMUSP00000002320; ENSMUSG00000002250; Mus musculus. [Genome view]
Organism-specific databases
MGI	MGI:101884. Ppard.
Phylogenomic databases
HOVERGEN	Q7TSY1.
InParanoid	Q7TSY1.
Gene expression databases
ArrayExpress	Q7TSY1.
Bgee	Q7TSY1.
Genevestigator	Q7TSY1.
Family and domain databases
InterPro	IPR000324. VitD_rcpt. IPR001628. Znf_hrmn_rcpt. IPR013088. Znf_NHR/GATA. [Graphical view]
Gene3D	G3DSA:3.30.50.10. Znf_NHR/GATA. 1 hit.
Pfam	PF00105. zf-C4. 1 hit. [Graphical view]
PRINTS	PR00047. STROIDFINGER. PR00350. VITAMINDR.
SMART	SM00399. ZnF_C4. 1 hit. [Graphical view]
PROSITE	PS00031. NUCLEAR_REC_DBD_1. 1 hit. PS51030. NUCLEAR_REC_DBD_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
SOURCE	Search...

Entry information

Entry name

Q7TSY1_MOUSE

Accession

Primary (citable) accession number: Q7TSY1

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	January 19, 2010
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)