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Q7TSB6 (Q7TSB6_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Hearing impairment protein DFNA5 EMBL AAP35047.1
Gene names
Name:Dfna5 RGD 727871
Synonyms:Dfna5h RGD 727871
OrganismRattus norvegicus (Rat) EMBL AAP35047.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length228 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAP35047.1

Sequences

Sequence LengthMass (Da)Tools
Q7TSB6 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 67859030C60B697D

FASTA22825,362
        10         20         30         40         50         60 
KQATLHLERS FRSFAVLPAQ QQMALFCILQ KILFDEELLR ALEQVCDDVA GGLWSSQAIL 

        70         80         90        100        110        120 
AMEELTGSQQ QDLTAFLKLV GYRVQGEHPG PQDEVSNQKL FATAYFLVSA LAEMPDNATV 

       130        140        150        160        170        180 
FLGTCCKLHV IPSLCHLLHA LSDDSVCDFQ DPTLAPLRDT ERFGIVQRLF ASADIALERM 

       190        200        210        220 
QFSAKATILK DSCMFPLILC ITLSGLYTLS KEHEEHLCQS EVHATSQD

« Hide

References

[1]"A yeast model for the study of human DFNA5, a gene mutated in nonsyndromic hearing impairment."
Gregan J., Van Laer L., Lieto L.D., Van Camp G., Kearsey S.E.
Biochim. Biophys. Acta 1638:179-186(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sprague-Dawley EMBL AAP35047.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY194291 mRNA. Translation: AAP35047.1.
IPIIPI00382346.
UniGeneRn.96433.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000013264.
Q7TSB6.

Proteomic databases

PaxDbQ7TSB6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCRGD:727871. rat.

Organism-specific databases

RGD727871. Dfna5.

Phylogenomic databases

eggNOGNOG40145.
HOGENOMHOG000065726.
HOVERGENHBG051340.
InParanoidQ7TSB6.
OrthoDBEOG4BVRTX.

Gene expression databases

GenevestigatorQ7TSB6.

Family and domain databases

InterProIPR007677. Gasdermin.
[Graphical view]
PfamPF04598. Gasdermin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ7TSB6_RAT
AccessionPrimary (citable) accession number: Q7TSB6
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 3, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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