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Protein

Olfactory receptor

Gene

Olfr1288

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotationSAAS annotation, Receptor, Transducer

Keywords - Biological processi

OlfactionUniRule annotationSAAS annotation, Sensory transduction

Names & Taxonomyi

Protein namesi
Recommended name:
Olfactory receptorUniRule annotation
Gene namesi
Name:Olfr1288Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:3031122. Olfr1288.

Subcellular locationi

  • Cell membrane UniRule annotationSAAS annotation; Multi-pass membrane protein UniRule annotationSAAS annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei25 – 5026HelicalUniRule annotationAdd
BLAST
Transmembranei57 – 7822HelicalUniRule annotationAdd
BLAST
Transmembranei98 – 12023HelicalUniRule annotationAdd
BLAST
Transmembranei141 – 16424HelicalUniRule annotationAdd
BLAST
Transmembranei205 – 22521HelicalUniRule annotationAdd
BLAST
Transmembranei237 – 25822HelicalUniRule annotationAdd
BLAST
Transmembranei270 – 28920HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneUniRule annotationSAAS annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000100485.

Structurei

3D structure databases

SMRiQ7TQY0. Positions 28-303.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 287247G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IIJ2. Eukaryota.
ENOG411142B. LUCA.
GeneTreeiENSGT00760000118815.
HOGENOMiHOG000041362.
HOVERGENiHBG017625.
KOiK04257.
OMAiYLMIMNP.
OrthoDBiEOG78H3TR.
TreeFamiTF337251.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7TQY0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDQVNASALP EFVLLGLAQS FGTQIFFGLF FSLFYVGILF GNLFIVFIVI
60 70 80 90 100
VDSHLHFPMY ILLANLSLID LGLSSTTIPR TISDLFTGCK VISFHSCMTQ
110 120 130 140 150
MFFIHVMGGV EMVLLIAMAY DRYIAICKPL HYLMIMNPKK CIILVIAAWV
160 170 180 190 200
IGMIHAVSQF LFVVNLPFCG PYNVGSFYCD FPRVIKLACM DTYKLEFVVS
210 220 230 240 250
ANSGFISMCT FFFLITSYIF ILASVRQHSS TDLSKAFVTL SAHITVVVLF
260 270 280 290 300
FIPCMFLYVW PFPTKSLDNF FAIVDFVLTP VLNPTIYTLR NKDMRLAIRR
310
LSRQVLSSRE FI
Length:312
Mass (Da):35,424
Last modified:October 1, 2003 - v1
Checksum:iD297339CDE9DD420
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL731699 Genomic DNA. No translation available.
AY318493 Genomic DNA. Translation: AAP71682.1.
RefSeqiNP_666512.2. NM_146400.2.
UniGeneiMm.377479.

Genome annotation databases

EnsembliENSMUST00000104889; ENSMUSP00000100485; ENSMUSG00000044039.
GeneIDi258395.
KEGGimmu:258395.
UCSCiuc008lno.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL731699 Genomic DNA. No translation available.
AY318493 Genomic DNA. Translation: AAP71682.1.
RefSeqiNP_666512.2. NM_146400.2.
UniGeneiMm.377479.

3D structure databases

SMRiQ7TQY0. Positions 28-303.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000100485.

Protein family/group databases

GPCRDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000104889; ENSMUSP00000100485; ENSMUSG00000044039.
GeneIDi258395.
KEGGimmu:258395.
UCSCiuc008lno.1. mouse.

Organism-specific databases

CTDi258395.
MGIiMGI:3031122. Olfr1288.

Phylogenomic databases

eggNOGiENOG410IIJ2. Eukaryota.
ENOG411142B. LUCA.
GeneTreeiENSGT00760000118815.
HOGENOMiHOG000041362.
HOVERGENiHBG017625.
KOiK04257.
OMAiYLMIMNP.
OrthoDBiEOG78H3TR.
TreeFamiTF337251.

Miscellaneous databases

NextBioi389245.
SOURCEiSearch...

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR000725. Olfact_rcpt.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PR00245. OLFACTORYR.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels."
    Young J.M., Shykind B.M., Lane R.P., Tonnes-Priddy L., Ross J.A., Walker M., Williams E.M., Trask B.J.
    Genome Biol. 4:R71.1-R71.13(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Sanders K.
    Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  4. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiQ7TQY0_MOUSE
AccessioniPrimary (citable) accession number: Q7TQY0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 13, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.