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Unreviewed, UniProtKB/TrEMBL Q7TQ90 (Q7TQ90_RAT)

Last modified January 19, 2010. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Ac1002 EMBL AAP78744.1
Gene names
Name: Adh4 RGD 71028
OrganismRattus norvegicus (Rat) EMBL AAP78744.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

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Protein attributes

Sequence length872 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Cofactor

Zinc By similarity. RuleBase RU000467V1

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Ontologies

Keywords
   LigandMetal-binding RuleBase RU000467V1
Zinc RuleBase RU000467V1
   Molecular functionOxidoreductase RuleBase RU000467V1
Gene Ontology (GO)
   Biological processethanol oxidation

Inferred from direct assay. Source: RGD

formaldehyde catabolic process

Inferred from electronic annotation. Source: Compara

oxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

peptidyl-cysteine S-nitrosylation

Inferred from electronic annotation. Source: Compara

positive regulation of blood pressure

Inferred from electronic annotation. Source: Compara

respiratory system process

Inferred from electronic annotation. Source: Compara

response to lipopolysaccharide

Inferred from electronic annotation. Source: Compara

response to nitrosative stress

Inferred from electronic annotation. Source: Compara

response to redox state

Inferred from electronic annotation. Source: Compara

retinoid metabolic process

Inferred from electronic annotation. Source: Compara

   Cellular componentmitochondrion

Inferred from electronic annotation. Source: Compara

soluble fraction

Inferred from direct assay. Source: RGD

   Molecular functionNAD or NADH binding

Inferred from direct assay. Source: RGD

S-(hydroxymethyl)glutathione dehydrogenase activity

Inferred from electronic annotation. Source: Compara

alcohol dehydrogenase (NAD) activity

Inferred from direct assay. Source: RGD

ethanol binding

Inferred from direct assay. Source: RGD

fatty acid binding

Inferred from electronic annotation. Source: Compara

formaldehyde dehydrogenase activity

Inferred from electronic annotation. Source: Compara

protein homodimerization activity

Inferred from electronic annotation. Source: Compara

zinc ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q7TQ90-1 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: C744F0D6D0A4C208

FASTA87293,847
        10         20         30         40         50         60 
MCDSGELWPM TPVLRPHVAQ VITCKAAIAW KTDSPLCIEE IEVSPPKAHE VRIKVIATCV 

        70         80         90        100        110        120 
CPTDINATNP KKKALFPVVL GHECAGIVES VGPGVTNFKP GDKVIPFFAP QCKKCKLCLS 

       130        140        150        160        170        180 
PLTNLCGKLR NFKYPTIDQE LMEDRTSRFT CKGRSIYHFM GVSSFSQYTV VSEANLARVD 

       190        200        210        220        230        240 
DEANLERVCL IGCGFTSGYG AAINTAKVTP GSACAVFGLG CVGLSAVIGC KIAGASRIIA 

       250        260        270        280        290        300 
IDINSEKFPK AKALGATDCL NPRDLDKPVQ DVITELTGGG VDFSLDCAGT AQTLGRAQER 

       310        320        330        340        350        360 
QDPCLRHRRN LKETDRINSS LHPNPVGGRA EPSERQTRLG NQKRLQSVHI QTPEENTKRH 

       370        380        390        400        410        420 
LEPWCTEAPG KSGADLPGCC RRGEDLGSTP RANLSLGTTG WKSVDSVPNL VTDYKNKKFD 

       430        440        450        460        470        480 
LDLLVTHALP FDKINDAIDL MNQGKRHLLP PPRKPAYIKP RLRRSAPPLT HAGLIPGFRY 

       490        500        510        520        530        540 
TFVPLRSLDP ELADMANQVI RCKAAVAWEA GKPLSIEEIE VAPPQAHEVR IKIIATAVCH 

       550        560        570        580        590        600 
TDAYTLSGAD PEGCFPVILG HEGAGIVESV GEGVTKLKAG DTVIPLYIPQ CGECKFCLNP 

       610        620        630        640        650        660 
KTNLCQKIRV TQGKGLMPDG TSRFTCKGKP ILHFMGTSTF SEYTVVADIS VAKIDPSAPL 

       670        680        690        700        710        720 
DKVCLLGCGI STGYGAAVNT AKVEPGSTCA VFGLGGVGLA VIMGCKVAGA SRIIGIDINK 

       730        740        750        760        770        780 
DKFAKAKEFG ATECINPQDF SKSIQEVLIE MTDGGVDFSF ECIGNVKVMK PLSMPWPESQ 

       790        800        810        820        830        840 
RSALEAAHKG WGVSVVVGVA ASGEEISTRP FQLVTGRTWK GTAFGGWKSV ESVPKLVSEY 

       850        860        870 
MSKKIKVDEF VTGNLSFDQI NKAFDLMHSG NR

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References

[1]"Liver regeneration after PH."
Xu C.S., Li W.Q., Li Y.C., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Yan H.M., Chang C.F., Zhao L.F., Ma H., Wang L., Wang S.F., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sprague-Dawley EMBL AAP78744.1.

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY310136 mRNA. Translation: AAP78744.1.
IPIIPI00200447.
UniGeneRn.98159

3D structure databases

HSSPHSSP built from PDB template 1E3I based on UniProtKB Q9QYY9.
SMRQ7TQ90. Positions 19-445, 496-870.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ7TQ90.

Genome annotation databases

EnsemblENSRNOT00000031437; ENSRNOP00000031961; ENSRNOG00000033854; Rattus norvegicus. [Genome view]
UCSCAY310136. rat.

Phylogenomic databases

HOVERGENQ7TQ90.
InParanoidQ7TQ90.
OrthoDBEOG9K0T6S.
PhylomeDBQ7TQ90.

Gene expression databases

ArrayExpressQ7TQ90.
GenevestigatorQ7TQ90.

Family and domain databases

InterProIPR014183. ADH_3.
IPR013154. ADH_GroES-like.
IPR002085. ADH_SF_Zn.
IPR013149. ADH_Zn-bd.
IPR002328. ADH_Zn_CS.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11695. ADH_Sf_Zn. 1 hit.
PfamPF08240. ADH_N. 2 hits.
PF00107. ADH_zinc_N. 2 hits.
[Graphical view]
TIGRFAMsTIGR02818. adh_III_F_hyde. 1 hit.
PROSITEPS00059. ADH_ZINC. 2 hits.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ7TQ90_RAT
AccessionPrimary (citable) accession number: Q7TQ90
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: January 19, 2010
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information