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Q7TQ11

- Q7TQ11_RAT

UniProt

Q7TQ11 - Q7TQ11_RAT

Protein
Submitted name:

Aa1018

Gene

Vtn

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 70 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. extracellular matrix binding Source: Ensembl
    2. polysaccharide binding Source: InterPro
    3. scavenger receptor activity Source: InterPro

    GO - Biological processi

    1. cell adhesion mediated by integrin Source: Ensembl
    2. extracellular matrix organization Source: Ensembl
    3. immune response Source: InterPro
    4. negative regulation of endopeptidase activity Source: Ensembl
    5. positive regulation of cell-substrate adhesion Source: Ensembl
    6. positive regulation of peptidyl-tyrosine phosphorylation Source: Ensembl
    7. positive regulation of protein binding Source: Ensembl
    8. positive regulation of receptor-mediated endocytosis Source: Ensembl
    9. positive regulation of smooth muscle cell migration Source: Ensembl
    10. smooth muscle cell-matrix adhesion Source: Ensembl

    Enzyme and pathway databases

    ReactomeiREACT_198300. Syndecan interactions.
    REACT_198592. Molecules associated with elastic fibres.
    REACT_198757. ECM proteoglycans.
    REACT_199224. Regulation of Complement cascade.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Aa1018Imported
    Gene namesi
    Name:VtnImported
    OrganismiRattus norvegicus (Rat)
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi3967. Vtn.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular space Source: Ensembl
    2. proteinaceous extracellular matrix Source: Ensembl

    PTM / Processingi

    Proteomic databases

    PRIDEiQ7TQ11.

    Expressioni

    Gene expression databases

    ArrayExpressiQ7TQ11.
    GenevestigatoriQ7TQ11.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7TQ11.
    SMRiQ7TQ11. Positions 20-70.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000133161.
    HOVERGENiHBG002902.
    InParanoidiQ7TQ11.
    PhylomeDBiQ7TQ11.
    TreeFamiTF332780.

    Family and domain databases

    Gene3Di2.110.10.10. 3 hits.
    InterProiIPR000585. Hemopexin-like_dom.
    IPR018487. Hemopexin-like_repeat.
    IPR018486. Hemopexin_CS.
    IPR020436. Somatomedin_B_chordata.
    IPR001212. Somatomedin_B_dom.
    [Graphical view]
    PfamiPF00045. Hemopexin. 4 hits.
    PF01033. Somatomedin_B. 1 hit.
    [Graphical view]
    PRINTSiPR00022. SOMATOMEDINB.
    SMARTiSM00120. HX. 4 hits.
    SM00201. SO. 1 hit.
    [Graphical view]
    SUPFAMiSSF50923. SSF50923. 3 hits.
    PROSITEiPS00024. HEMOPEXIN. 2 hits.
    PS51642. HEMOPEXIN_2. 4 hits.
    PS00524. SMB_1. 1 hit.
    PS50958. SMB_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q7TQ11-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASLRPFFIL ALLALVSLAD QESCKGRCTQ GFMASKKCQC DELCTYYQSC    50
    CVDYMEQCKP QVTRGDVFTM PEDEYWSYDY PEETKNSTST GVQSENTSLH 100
    FNLKPRAEET IKPTTPDPQE QSNTQEPEVG QQGVAPRPDT TDEGTSEFPE 150
    EELCSGKPFD AFTDLKNGSL FAFRGDSVDR FDGGEYCYEL DETAVRPGYP 200
    KLIQDVWGIE GPIDAAFTRI NCQGKTYLFK GSQYWRFEDG VLDPDYPRNI 250
    SEGFSGIPDN VDAALALPAH SYSGRERVYF FKGTQGKQYW EYEFQQQPSQ 300
    EECEGSSLSA VFEHFALLQR DSWENIFELL FWGRSSDGAK GPQFISRDWH 350
    GVPGKVDAAM AGRIYITGST FRSVQAKKQK SGRRSRKRYR SRRGRGHSRS 400
    RSRSMSSRRP SRSVWFSLLS SEESGLGTYN YDYDMNWRIP ATCEPIQSVY 450
    FFSGDKYYRV NLRTRRVDSV NPPYPRSIAQ YWLGCPTSEK 490
    Length:490
    Mass (Da):55,960
    Last modified:October 1, 2003 - v1
    Checksum:i0FCBCB6FF5C4E499
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY318963 mRNA. Translation: AAP85374.1.
    UniGeneiRn.87493.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY318963 mRNA. Translation: AAP85374.1 .
    UniGenei Rn.87493.

    3D structure databases

    ProteinModelPortali Q7TQ11.
    SMRi Q7TQ11. Positions 20-70.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q7TQ11.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    RGDi 3967. Vtn.

    Phylogenomic databases

    HOGENOMi HOG000133161.
    HOVERGENi HBG002902.
    InParanoidi Q7TQ11.
    PhylomeDBi Q7TQ11.
    TreeFami TF332780.

    Enzyme and pathway databases

    Reactomei REACT_198300. Syndecan interactions.
    REACT_198592. Molecules associated with elastic fibres.
    REACT_198757. ECM proteoglycans.
    REACT_199224. Regulation of Complement cascade.

    Miscellaneous databases

    PROi Q7TQ11.

    Gene expression databases

    ArrayExpressi Q7TQ11.
    Genevestigatori Q7TQ11.

    Family and domain databases

    Gene3Di 2.110.10.10. 3 hits.
    InterProi IPR000585. Hemopexin-like_dom.
    IPR018487. Hemopexin-like_repeat.
    IPR018486. Hemopexin_CS.
    IPR020436. Somatomedin_B_chordata.
    IPR001212. Somatomedin_B_dom.
    [Graphical view ]
    Pfami PF00045. Hemopexin. 4 hits.
    PF01033. Somatomedin_B. 1 hit.
    [Graphical view ]
    PRINTSi PR00022. SOMATOMEDINB.
    SMARTi SM00120. HX. 4 hits.
    SM00201. SO. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50923. SSF50923. 3 hits.
    PROSITEi PS00024. HEMOPEXIN. 2 hits.
    PS51642. HEMOPEXIN_2. 4 hits.
    PS00524. SMB_1. 1 hit.
    PS50958. SMB_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Liver regeneration after PH."
      Xu C.S., Li W.Q., Li Y.C., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Yan H.M., Chang C.F., Zhao L.F., Ma H., Wang L., Wang S.F., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
      Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiQ7TQ11_RAT
    AccessioniPrimary (citable) accession number: Q7TQ11
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 1, 2003
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 70 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)