Voltage-dependent calcium channel alpha 1C subunit - Rattus norvegicus (Rat)

Contribute

Read comments (0) or add your own

Unreviewed, UniProtKB/TrEMBL Q7TQ09 (Q7TQ09_RAT)

Last modified January 19, 2010. Version 31. History...

Clusters with 100%, 90%, 50% identity |

Third-party data |

Customize display

text xml rdf/xml gff fasta

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Voltage-dependent calcium channel alpha 1C subunit EMBL AAP85532.1

Gene names

Name:

Cacna1c RGD 2245

Organism

Rattus norvegicus (Rat) EMBL AAP85532.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	151 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	calcium ion transport Inferred from mutant phenotype. Source: RGD
Cellular component	T-tubule Inferred from direct assay. Source: RGD membrane fraction Inferred from direct assay. Source: RGD voltage-gated calcium channel complex Inferred from direct assay. Source: RGD
Molecular function	protein domain specific binding Inferred from physical interaction. Source: RGD protein phosphatase 2A binding Inferred from physical interaction. Source: RGD voltage-gated calcium channel activity Inferred from direct assay. Source: RGD
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

1

EMBL AAP85532.1

Non-terminal residue

1

EMBL AAP85532.1

Sequences

Sequence

Length

Mass (Da)

Tools

Q7TQ09-1 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 96D7DC384D450B88
Show »

151

17,584

        10         20         30         40         50         60 
GEFSKEREKA KARGDFQKLR EKQQLEEDLK GYLDWITQAE DIDPENEDEG MDEDKPRNRG 

        70         80         90        100        110        120 
APAGLHDQKK GKFAWFSHST ETHVSMPTSE TESVNTENVA GGDIEGENCG ARLAHRISKS 

       130        140        150 
KFSRYWRRWN RFCRRKCRAA VKSNVFYWLV I

References

[1]	"Calcium channel alpha 1C subunit splice variant in rat aorta." Yokoyama U., Minamisawa S., Nakagome M., Uemura N., Yokota S., Ishikawa Y. Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Aorta EMBL AAP85532.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY323810 mRNA. Translation: AAP85532.1.
IPI	IPI00551614.
UniGene	Rn.9827
3D structure databases
HSSP	HSSP built from PDB template 1T0J based on UniProtKB Q13933.
ModBase	Search...
Protein-protein interaction databases
STRING	Q7TQ09.
Genome annotation databases
Ensembl	ENSRNOT00000009343; ENSRNOP00000009343; ENSRNOG00000007090; Rattus norvegicus. [Genome view]
Phylogenomic databases
HOVERGEN	Q7TQ09.
Gene expression databases
ArrayExpress	Q7TQ09.
Genevestigator	Q7TQ09.
Family and domain databases
InterPro	IPR005451. VDCC_L_a1csu. IPR005446. VDCC_L_a1su. [Graphical view]
PANTHER	PTHR10037:SF47. LVDCCAlpha1C. 1 hit.
PRINTS	PR01630. LVDCCALPHA1.
ProtoNet	Search...

Entry information

Entry name

Q7TQ09_RAT

Accession

Primary (citable) accession number: Q7TQ09

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	January 19, 2010
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information