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Protein
Submitted name:

Gtf2h1 protein

Gene

Gtf2h1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Gtf2h1 proteinImported
Gene namesi
Name:Gtf2h1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1277216. Gtf2h1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ7TPY0.

Expressioni

Gene expression databases

BgeeiQ7TPY0.
GenevisibleiQ7TPY0. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000006774.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini73 – 12856BSDInterPro annotationAdd
BLAST
Domaini153 – 20553BSDInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2074. Eukaryota.
ENOG410XRI6. LUCA.
HOVERGENiHBG060375.
KOiK03141.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR005607. BSD_dom.
IPR011993. PH_dom-like.
IPR027079. Tfb1/p62.
IPR013876. TFIIH_BTF_p62_N.
[Graphical view]
PANTHERiPTHR12856. PTHR12856. 1 hit.
PfamiPF03909. BSD. 1 hit.
PF08567. PH_TFIIH. 1 hit.
[Graphical view]
SMARTiSM00751. BSD. 2 hits.
[Graphical view]
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiPS50858. BSD. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7TPY0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAERIAWAPE GKDRFTISHM YADIKCQKIS PEGKAKIQLQ LVLHAGDTTN
60 70 80 90 100
FHFSNESTAV KERDAVKDLL QQLLPKFKRK ANKELEEKNR MLQEDPVLFQ
110 120 130 140 150
LYKDLVVSQV ISAEEFWANR LNVNATDSST SSHKQDVGIS AAFLADVRPQ
160 170 180 190 200
TDGCNGLRYN LTSDIIESIF RTYPAVKMKY AETVPHNMTE KEFWTRFFQS
210 220 230 240 250
HYFHRDRLNT GSKDLFAECA KIDEKGLKTM VSLGVKNPML DLTSLEDKPL
260 270 280 290 300
DEGYGISSVP STSNSKSIKE NSNAAIIKRF NHHSAMVLAA GLRKQQAQNG
310 320 330 340 350
QNGEPSSVDG NSGDTDCFQP AVKRAKLQES IEYEDLGNNN SVKTIALNLK
360 370 380 390 400
KSDRYYHGPT PIQSLQYATS QDIINSFQSI RQEMEAYTPK LTQVLSSSAA
410 420 430 440 450
SSTITALSPG GALMQGGTQQ AVNQMVPNDI QSELKHLYVA VGELLRHFWS
460 470 480 490 500
CFPVNTPFLE EKVVKMKSNL ERFQVTKLCP FQEKIRRQYL STNLVSHIEE
510 520
MLQTAYNKLH AWQSRRLMKK T
Length:521
Mass (Da):58,861
Last modified:October 1, 2003 - v1
Checksum:iDB73AA7886FF0835
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC052837 mRNA. Translation: AAH52837.1.
RefSeqiNP_001278004.1. NM_001291075.1.
NP_032212.3. NM_008186.4.
UniGeneiMm.22700.

Genome annotation databases

GeneIDi14884.
KEGGimmu:14884.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC052837 mRNA. Translation: AAH52837.1.
RefSeqiNP_001278004.1. NM_001291075.1.
NP_032212.3. NM_008186.4.
UniGeneiMm.22700.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000006774.

Proteomic databases

PaxDbiQ7TPY0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi14884.
KEGGimmu:14884.

Organism-specific databases

CTDi2965.
MGIiMGI:1277216. Gtf2h1.

Phylogenomic databases

eggNOGiKOG2074. Eukaryota.
ENOG410XRI6. LUCA.
HOVERGENiHBG060375.
KOiK03141.

Miscellaneous databases

ChiTaRSiGtf2h1. mouse.
NextBioi287163.
SOURCEiSearch...

Gene expression databases

BgeeiQ7TPY0.
GenevisibleiQ7TPY0. MM.

Family and domain databases

Gene3Di2.30.29.30. 1 hit.
InterProiIPR005607. BSD_dom.
IPR011993. PH_dom-like.
IPR027079. Tfb1/p62.
IPR013876. TFIIH_BTF_p62_N.
[Graphical view]
PANTHERiPTHR12856. PTHR12856. 1 hit.
PfamiPF03909. BSD. 1 hit.
PF08567. PH_TFIIH. 1 hit.
[Graphical view]
SMARTiSM00751. BSD. 2 hits.
[Graphical view]
SUPFAMiSSF50729. SSF50729. 1 hit.
PROSITEiPS50858. BSD. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6JImported.
    Tissue: EggImported.

Entry informationi

Entry nameiQ7TPY0_MOUSE
AccessioniPrimary (citable) accession number: Q7TPY0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: March 16, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.