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Protein
Submitted name:

Cbx1 protein

Gene

Cbx1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Cbx1 proteinImported
Submitted name:
Chromobox protein homolog 1Imported
Gene namesi
Name:Cbx1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:105369. Cbx1.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

MaxQBiQ7TPM0.

Expressioni

Gene expression databases

BgeeiENSMUSG00000018666.
ExpressionAtlasiQ7TPM0. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000091475.

Structurei

3D structure databases

ProteinModelPortaliQ7TPM0.
SMRiQ7TPM0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 79ChromoInterPro annotationAdd BLAST59
Domaini117 – 138ChromoInterPro annotationAdd BLAST22

Phylogenomic databases

eggNOGiENOG410KDV3. Eukaryota.
ENOG4111H4A. LUCA.
GeneTreeiENSGT00510000046310.
HOGENOMiHOG000220852.
HOVERGENiHBG000400.

Family and domain databases

InterProiView protein in InterPro
IPR000953. Chromo/chromo_shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR008251. Chromo_shadow_dom.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
PfamiView protein in Pfam
PF00385. Chromo. 1 hit.
PF01393. Chromo_shadow. 1 hit.
PRINTSiPR00504. CHROMODOMAIN.
SMARTiView protein in SMART
SM00298. CHROMO. 1 hit.
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiView protein in PROSITE
PS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 2 hits.

Sequencei

Sequence statusi: Complete.

Q7TPM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKKQNKKKV EEVLEEEEEE YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN
60 70 80 90 100
TWEPEENLDC PDLIAEFLQS QKTAHETDKS EGGKRKADSD SEDKGEESKP
110 120 130
KKKKEESEKP RGFARGLEPE RIIGATDSSG ELMFLMKW
Length:138
Mass (Da):15,981
Last modified:October 1, 2003 - v1
Checksum:i12D7E31386513C7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596384 Genomic DNA. No translation available.
BC055290 mRNA. Translation: AAH55290.1.
UniGeneiMm.29055.

Genome annotation databases

EnsembliENSMUST00000018810; ENSMUSP00000018810; ENSMUSG00000018666.
ENSMUST00000134585; ENSMUSP00000137834; ENSMUSG00000018666.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596384 Genomic DNA. No translation available.
BC055290 mRNA. Translation: AAH55290.1.
UniGeneiMm.29055.

3D structure databases

ProteinModelPortaliQ7TPM0.
SMRiQ7TPM0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000091475.

Proteomic databases

MaxQBiQ7TPM0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000018810; ENSMUSP00000018810; ENSMUSG00000018666.
ENSMUST00000134585; ENSMUSP00000137834; ENSMUSG00000018666.

Organism-specific databases

MGIiMGI:105369. Cbx1.

Phylogenomic databases

eggNOGiENOG410KDV3. Eukaryota.
ENOG4111H4A. LUCA.
GeneTreeiENSGT00510000046310.
HOGENOMiHOG000220852.
HOVERGENiHBG000400.

Miscellaneous databases

ChiTaRSiCbx1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000018666.
ExpressionAtlasiQ7TPM0. baseline and differential.

Family and domain databases

InterProiView protein in InterPro
IPR000953. Chromo/chromo_shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR008251. Chromo_shadow_dom.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
PfamiView protein in Pfam
PF00385. Chromo. 1 hit.
PF01393. Chromo_shadow. 1 hit.
PRINTSiPR00504. CHROMODOMAIN.
SMARTiView protein in SMART
SM00298. CHROMO. 1 hit.
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiView protein in PROSITE
PS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ7TPM0_MOUSE
AccessioniPrimary (citable) accession number: Q7TPM0
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 12, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.