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Protein

Protein FAM19A1

Gene

Fam19a1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein FAM19A1
Alternative name(s):
Chemokine-like protein TAFA-1
Gene namesi
Name:Fam19a1
Synonyms:Tafa1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:2443695. Fam19a1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_000004272220 – 133Protein FAM19A1Add BLAST114

Proteomic databases

PaxDbiQ7TPG8.
PRIDEiQ7TPG8.

PTM databases

PhosphoSitePlusiQ7TPG8.

Expressioni

Gene expression databases

BgeeiENSMUSG00000059187.
GenevisibleiQ7TPG8. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000074589.

Structurei

3D structure databases

ProteinModelPortaliQ7TPG8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAM19/TAFA family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IWJ7. Eukaryota.
ENOG410YH4T. LUCA.
GeneTreeiENSGT00390000001768.
HOGENOMiHOG000236302.
HOVERGENiHBG081496.
InParanoidiQ7TPG8.
OMAiWILYLWI.
OrthoDBiEOG091G0TKK.
PhylomeDBiQ7TPG8.
TreeFamiTF331749.

Family and domain databases

InterProiIPR020350. Chemokine-like_FAM19A2.
[Graphical view]
PfamiPF12020. TAFA. 1 hit.
[Graphical view]
ProDomiPD298472. Chemokine-like_2FAM19A2. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7TPG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMVSAMSWA LYLWISACAM LLCHGSLQHT FQQHHLHRPE GGTCEVIAAH
60 70 80 90 100
RCCNKNRIEE RSQTVKCSCL PGKVAGTTRN RPSCVDASIV IGKWWCEMEP
110 120 130
CLEGEECKTL PDNSGWMCAT GNKIKTTRIH PRT
Length:133
Mass (Da):14,873
Last modified:October 1, 2003 - v1
Checksum:iC5C20C764F8E7386
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY325120 mRNA. Translation: AAP92412.1.
BC132179 mRNA. Translation: AAI32180.1.
BC132181 mRNA. Translation: AAI32182.1.
CCDSiCCDS39574.1.
RefSeqiNP_877960.1. NM_182808.3.
UniGeneiMm.489890.

Genome annotation databases

EnsembliENSMUST00000075080; ENSMUSP00000074589; ENSMUSG00000059187.
ENSMUST00000122120; ENSMUSP00000113152; ENSMUSG00000059187.
GeneIDi320265.
KEGGimmu:320265.
UCSCiuc009dae.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY325120 mRNA. Translation: AAP92412.1.
BC132179 mRNA. Translation: AAI32180.1.
BC132181 mRNA. Translation: AAI32182.1.
CCDSiCCDS39574.1.
RefSeqiNP_877960.1. NM_182808.3.
UniGeneiMm.489890.

3D structure databases

ProteinModelPortaliQ7TPG8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000074589.

PTM databases

PhosphoSitePlusiQ7TPG8.

Proteomic databases

PaxDbiQ7TPG8.
PRIDEiQ7TPG8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000075080; ENSMUSP00000074589; ENSMUSG00000059187.
ENSMUST00000122120; ENSMUSP00000113152; ENSMUSG00000059187.
GeneIDi320265.
KEGGimmu:320265.
UCSCiuc009dae.2. mouse.

Organism-specific databases

CTDi407738.
MGIiMGI:2443695. Fam19a1.

Phylogenomic databases

eggNOGiENOG410IWJ7. Eukaryota.
ENOG410YH4T. LUCA.
GeneTreeiENSGT00390000001768.
HOGENOMiHOG000236302.
HOVERGENiHBG081496.
InParanoidiQ7TPG8.
OMAiWILYLWI.
OrthoDBiEOG091G0TKK.
PhylomeDBiQ7TPG8.
TreeFamiTF331749.

Miscellaneous databases

ChiTaRSiFam19a1. mouse.
PROiQ7TPG8.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000059187.
GenevisibleiQ7TPG8. MM.

Family and domain databases

InterProiIPR020350. Chemokine-like_FAM19A2.
[Graphical view]
PfamiPF12020. TAFA. 1 hit.
[Graphical view]
ProDomiPD298472. Chemokine-like_2FAM19A2. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiF19A1_MOUSE
AccessioniPrimary (citable) accession number: Q7TPG8
Secondary accession number(s): A2RSN6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 8, 2005
Last sequence update: October 1, 2003
Last modified: November 2, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.