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Q7TP90

- ARRD4_RAT

UniProt

Q7TP90 - ARRD4_RAT

Protein

Arrestin domain-containing protein 4

Gene

Arrdc4

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (01 Oct 2003)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. positive regulation of ubiquitin-protein transferase activity Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arrestin domain-containing protein 4
    Alternative name(s):
    Liver regeneration-related protein LRRG041/LRRGT00117
    Gene namesi
    Name:Arrdc4
    ORF Names:Ab1-209
    OrganismiRattus norvegicus (Rat)
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 1

    Organism-specific databases

    RGDi1311763. Arrdc4.

    Subcellular locationi

    GO - Cellular componenti

    1. endosome Source: Ensembl
    2. plasma membrane Source: Ensembl

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 300300Arrestin domain-containing protein 4PRO_0000244354Add
    BLAST

    Proteomic databases

    PaxDbiQ7TP90.
    PRIDEiQ7TP90.

    Expressioni

    Gene expression databases

    GenevestigatoriQ7TP90.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000014351.

    Structurei

    3D structure databases

    ProteinModelPortaliQ7TP90.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the arrestin family.Curated

    Phylogenomic databases

    eggNOGiNOG302750.
    GeneTreeiENSGT00550000074356.
    HOGENOMiHOG000237328.
    HOVERGENiHBG066469.
    OMAiLYSESHA.
    OrthoDBiEOG7P02HT.

    Family and domain databases

    InterProiIPR011021. Arrestin-like_N.
    IPR011022. Arrestin_C-like.
    IPR014756. Ig_E-set.
    [Graphical view]
    PfamiPF02752. Arrestin_C. 1 hit.
    PF00339. Arrestin_N. 1 hit.
    [Graphical view]
    SMARTiSM01017. Arrestin_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF81296. SSF81296. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Q7TP90-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSSQSSILVD FRPLATSFTG KYGSIQYCVR AVLERPQVPD QSVRRELQVV    50
    SHVDVNTPPL LTPMLKTQEK MVGCWLFTSG PVSLSVKIER KGYCNGEAIP 100
    IYAEIENCSS RLVVPKAAIF QTQTYLASGK TKTVRHMVAN VRGNHIGSGS 150
    TDTWNGKMLK IPPVTPSILD CCIIRVYIHI PGAKKLMLEL PLVIGTIPYS 200
    GFGRRNSSMA SQFSMDMCWL ALALPEQPEA PPNYADVVSE EEFSRHIPPY 250
    PQPSACDGEA CYSMFACIQE FRFQPPPLYS ESHAQLFCLQ PVGPTNRAHF 300
    Length:300
    Mass (Da):33,275
    Last modified:October 1, 2003 - v1
    Checksum:i1EA8AA47BBD27E8A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY325151 mRNA. Translation: AAP92552.1.
    AY539868 mRNA. Translation: AAS66208.1.
    RefSeqiNP_001041318.1. NM_001047853.1.
    UniGeneiRn.14864.

    Genome annotation databases

    EnsembliENSRNOT00000051402; ENSRNOP00000045721; ENSRNOG00000010775.
    GeneIDi293019.
    KEGGirno:293019.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY325151 mRNA. Translation: AAP92552.1 .
    AY539868 mRNA. Translation: AAS66208.1 .
    RefSeqi NP_001041318.1. NM_001047853.1.
    UniGenei Rn.14864.

    3D structure databases

    ProteinModelPortali Q7TP90.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000014351.

    Proteomic databases

    PaxDbi Q7TP90.
    PRIDEi Q7TP90.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000051402 ; ENSRNOP00000045721 ; ENSRNOG00000010775 .
    GeneIDi 293019.
    KEGGi rno:293019.

    Organism-specific databases

    CTDi 91947.
    RGDi 1311763. Arrdc4.

    Phylogenomic databases

    eggNOGi NOG302750.
    GeneTreei ENSGT00550000074356.
    HOGENOMi HOG000237328.
    HOVERGENi HBG066469.
    OMAi LYSESHA.
    OrthoDBi EOG7P02HT.

    Miscellaneous databases

    NextBioi 635192.

    Gene expression databases

    Genevestigatori Q7TP90.

    Family and domain databases

    InterProi IPR011021. Arrestin-like_N.
    IPR011022. Arrestin_C-like.
    IPR014756. Ig_E-set.
    [Graphical view ]
    Pfami PF02752. Arrestin_C. 1 hit.
    PF00339. Arrestin_N. 1 hit.
    [Graphical view ]
    SMARTi SM01017. Arrestin_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81296. SSF81296. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Liver regeneration after PH."
      Xu C.S., Zhang L., Chang C.F., Han H.P., Wang G.P., Chai L.Q., Yuan J.Y., Yang K.J., Zhao L.F., Ma H., Wang L., Wang S.F., Xing X.K., Shen G.M., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
      Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Liver.

    Entry informationi

    Entry nameiARRD4_RAT
    AccessioniPrimary (citable) accession number: Q7TP90
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 27, 2006
    Last sequence update: October 1, 2003
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3