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Protein
Submitted name:

Ab2-417

Gene

Tf

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

GTP-bindingSAAS annotation, Nucleotide-binding

Protein family/group databases

MEROPSiS60.970.

Names & Taxonomyi

Protein namesi
Submitted name:
Ab2-417Imported
Submitted name:
Cc1-8Imported
Gene namesi
Name:TfImported
Synonyms:SrprbImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi3845. Tf.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei745 – 76622HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 979960Sequence analysisPRO_5007711131Add
BLAST

Expressioni

Gene expression databases

BgeeiENSRNOG00000030625.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000012725.

Structurei

3D structure databases

SMRiQ7TMC7. Positions 23-676, 773-979.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 333309Transferrin-likeInterPro annotationAdd
BLAST
Domaini346 – 669324Transferrin-likeInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IEAI. Eukaryota.
ENOG410XQ36. LUCA.
HOVERGENiHBG000055.
OrthoDBiEOG091G0242.
PhylomeDBiQ7TMC7.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR024156. Small_GTPase_ARF.
IPR019009. SRP_receptor_beta_su.
IPR001156. Transferrin-like_dom.
IPR018195. Transferrin_Fe_BS.
[Graphical view]
PfamiPF09439. SRPRB. 1 hit.
PF00405. Transferrin. 2 hits.
[Graphical view]
PRINTSiPR00422. TRANSFERRIN.
SMARTiSM00094. TR_FER. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS51417. ARF. 1 hit.
PS00205. TRANSFERRIN_LIKE_1. 1 hit.
PS00206. TRANSFERRIN_LIKE_2. 2 hits.
PS00207. TRANSFERRIN_LIKE_3. 2 hits.
PS51408. TRANSFERRIN_LIKE_4. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7TMC7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFAVGALLA CAALGLCLAV PDKTVKWCAV SEHENTKCIS FRDHMKTVLP
60 70 80 90 100
ADGPRLACVK KTSYQDCIKA ISGGEADAIT LDGGWVYDAG LTPNNLKPVA
110 120 130 140 150
AEFYGSLEHP QTHYLAVAVV KKGTDFQLNQ LQGKKSCHTG LGRSAGWIIP
160 170 180 190 200
IGLLFCNLPE PRKPLEKDPV AFPQLCQLCP GCGCSPTQPF FGYVGAFKCL
210 220 230 240 250
RDGGGDVAFV KHTTIFEVLP QKADRDQYEL LCLDNTRKPV DQYEDCYLAR
260 270 280 290 300
IPSHAVVARN GDGKEDLIWE ILKVAQEHFG KGKSKDFQLF GSPLGKDLLF
310 320 330 340 350
KDSAFGLLRV PPRMDYRLYL GHSYVTAIRN QREGVCPEGS IDSAPVKWCA
360 370 380 390 400
LSHQERAKCD EWSVSSNGQI ECESAESTED CIDKIVNGEA DAMSLDGGHA
410 420 430 440 450
YIAGQCGLVP VMAENYDISS CTNPQSDVFP KGYYAVAVVK ASDSSINWNN
460 470 480 490 500
LKGKKSCHTG VDRTAGWNIP MGLLFSRINH CKFDEFFSQG CAPGYKKNST
510 520 530 540 550
LCDLCIGPAK CAPNNREGYN GYTGAFQCLV EKGDVAFVKH QTVLENTNGK
560 570 580 590 600
NTAAWAKDLK QEDFQLLCPD GTKKPVTEFA TCHLAQAPNH VVVSRKEKAA
610 620 630 640 650
RVSTVLTAQK DLFWKGDKDC TGNFCLFRSS TKDLLFRDDT KCLTKLPEGT
660 670 680 690 700
TYEEYLGAEY LQAVGNIRKC STSPVITPKN YNSRDAQRPA AAWSLGPRIF
710 720 730 740 750
GDPGRPRTSF MASANTRRVG DGAGGAFQPY LDSLRQELQQ RDPTLLSVAV
760 770 780 790 800
AVLAVLLTLV FWKFIWSRKS SQRAVLFVGL CDSGKTLLFV RLLTGQYRDT
810 820 830 840 850
QTSITDSSAI YKVNNNRGNS LTLIDLPGHE SLRLQFLDRF KSSARAVVFV
860 870 880 890 900
VDSATFQREV KDVAEFLYQV LIDSMALKNT PAFLVACNKQ DIAMAKSAKL
910 920 930 940 950
IQQQLEKELN TLRVTRSAAP STLDSSSTAP AQLGKKGKEF EFSQLPLKVE
960 970
FLECSAKGGR GDAGSADVQD LEKWLAKIA
Length:979
Mass (Da):107,412
Last modified:October 1, 2003 - v1
Checksum:i5BE80A6A1DD67D09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY325214 mRNA. Translation: AAP92615.1.
AY325241 mRNA. Translation: AAP92642.1.
UniGeneiRn.138078.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY325214 mRNA. Translation: AAP92615.1.
AY325241 mRNA. Translation: AAP92642.1.
UniGeneiRn.138078.

3D structure databases

SMRiQ7TMC7. Positions 23-676, 773-979.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000012725.

Protein family/group databases

MEROPSiS60.970.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi3845. Tf.

Phylogenomic databases

eggNOGiENOG410IEAI. Eukaryota.
ENOG410XQ36. LUCA.
HOVERGENiHBG000055.
OrthoDBiEOG091G0242.
PhylomeDBiQ7TMC7.

Gene expression databases

BgeeiENSRNOG00000030625.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR024156. Small_GTPase_ARF.
IPR019009. SRP_receptor_beta_su.
IPR001156. Transferrin-like_dom.
IPR018195. Transferrin_Fe_BS.
[Graphical view]
PfamiPF09439. SRPRB. 1 hit.
PF00405. Transferrin. 2 hits.
[Graphical view]
PRINTSiPR00422. TRANSFERRIN.
SMARTiSM00094. TR_FER. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS51417. ARF. 1 hit.
PS00205. TRANSFERRIN_LIKE_1. 1 hit.
PS00206. TRANSFERRIN_LIKE_2. 2 hits.
PS00207. TRANSFERRIN_LIKE_3. 2 hits.
PS51408. TRANSFERRIN_LIKE_4. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ7TMC7_RAT
AccessioniPrimary (citable) accession number: Q7TMC7
Secondary accession number(s): F1LMP2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: September 7, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.