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Protein
Submitted name:

Ab2-417

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandGTP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Ab2-417Imported
Submitted name:
Cc1-8Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei745 – 766HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_501353518420 – 979Sequence analysisAdd BLAST960

Proteomic databases

PRIDEiQ7TMC7

Interactioni

Protein-protein interaction databases

IntActiQ7TMC7, 1 interactor

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 333Transferrin-likeInterPro annotationAdd BLAST309
Domaini346 – 669Transferrin-likeInterPro annotationAdd BLAST324

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IEAI Eukaryota
ENOG410XQ36 LUCA
HOVERGENiHBG000055
OrthoDBiEOG091G0242

Family and domain databases

CDDicd04105 SR_beta, 1 hit
InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR024156 Small_GTPase_ARF
IPR019009 SRP_receptor_beta_su
IPR001156 Transferrin-like_dom
IPR018195 Transferrin_Fe_BS
PfamiView protein in Pfam
PF09439 SRPRB, 1 hit
PF00405 Transferrin, 2 hits
PRINTSiPR00422 TRANSFERRIN
SMARTiView protein in SMART
SM00094 TR_FER, 2 hits
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51417 ARF, 1 hit
PS00205 TRANSFERRIN_LIKE_1, 1 hit
PS00206 TRANSFERRIN_LIKE_2, 2 hits
PS00207 TRANSFERRIN_LIKE_3, 2 hits
PS51408 TRANSFERRIN_LIKE_4, 2 hits

Sequencei

Sequence statusi: Complete.

Q7TMC7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFAVGALLA CAALGLCLAV PDKTVKWCAV SEHENTKCIS FRDHMKTVLP
60 70 80 90 100
ADGPRLACVK KTSYQDCIKA ISGGEADAIT LDGGWVYDAG LTPNNLKPVA
110 120 130 140 150
AEFYGSLEHP QTHYLAVAVV KKGTDFQLNQ LQGKKSCHTG LGRSAGWIIP
160 170 180 190 200
IGLLFCNLPE PRKPLEKDPV AFPQLCQLCP GCGCSPTQPF FGYVGAFKCL
210 220 230 240 250
RDGGGDVAFV KHTTIFEVLP QKADRDQYEL LCLDNTRKPV DQYEDCYLAR
260 270 280 290 300
IPSHAVVARN GDGKEDLIWE ILKVAQEHFG KGKSKDFQLF GSPLGKDLLF
310 320 330 340 350
KDSAFGLLRV PPRMDYRLYL GHSYVTAIRN QREGVCPEGS IDSAPVKWCA
360 370 380 390 400
LSHQERAKCD EWSVSSNGQI ECESAESTED CIDKIVNGEA DAMSLDGGHA
410 420 430 440 450
YIAGQCGLVP VMAENYDISS CTNPQSDVFP KGYYAVAVVK ASDSSINWNN
460 470 480 490 500
LKGKKSCHTG VDRTAGWNIP MGLLFSRINH CKFDEFFSQG CAPGYKKNST
510 520 530 540 550
LCDLCIGPAK CAPNNREGYN GYTGAFQCLV EKGDVAFVKH QTVLENTNGK
560 570 580 590 600
NTAAWAKDLK QEDFQLLCPD GTKKPVTEFA TCHLAQAPNH VVVSRKEKAA
610 620 630 640 650
RVSTVLTAQK DLFWKGDKDC TGNFCLFRSS TKDLLFRDDT KCLTKLPEGT
660 670 680 690 700
TYEEYLGAEY LQAVGNIRKC STSPVITPKN YNSRDAQRPA AAWSLGPRIF
710 720 730 740 750
GDPGRPRTSF MASANTRRVG DGAGGAFQPY LDSLRQELQQ RDPTLLSVAV
760 770 780 790 800
AVLAVLLTLV FWKFIWSRKS SQRAVLFVGL CDSGKTLLFV RLLTGQYRDT
810 820 830 840 850
QTSITDSSAI YKVNNNRGNS LTLIDLPGHE SLRLQFLDRF KSSARAVVFV
860 870 880 890 900
VDSATFQREV KDVAEFLYQV LIDSMALKNT PAFLVACNKQ DIAMAKSAKL
910 920 930 940 950
IQQQLEKELN TLRVTRSAAP STLDSSSTAP AQLGKKGKEF EFSQLPLKVE
960 970
FLECSAKGGR GDAGSADVQD LEKWLAKIA
Length:979
Mass (Da):107,412
Last modified:October 1, 2003 - v1
Checksum:i5BE80A6A1DD67D09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY325214 mRNA Translation: AAP92615.1
AY325241 mRNA Translation: AAP92642.1
UniGeneiRn.138078

Similar proteinsi

Entry informationi

Entry nameiQ7TMC7_RAT
AccessioniPrimary (citable) accession number: Q7TMC7
Secondary accession number(s): F1LMP2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: May 23, 2018
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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