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Protein

Double gene block protein 2

Gene

ORF3

Organism
Turnip crinkle virus (TCV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Cell-to-cell movement function.Curated

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Viral movement protein

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Double gene block protein 2
Short name:
DGBp2
Alternative name(s):
Movement protein P9
Gene namesi
ORF Names:ORF3
OrganismiTurnip crinkle virus (TCV)
Taxonomic identifieri11988 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA positive-strand viruses, no DNA stageTombusviridaeCarmovirus
Virus hostiBrassica napus subsp. rapifera [TaxID: 3709]
Hypomyces [TaxID: 5130]
Moricandia arvensis (Purple mistress) (Brassica arvensis) [TaxID: 180540]
Proteomesi
  • UP000007403 Componenti: Genome
  • UP000009133 Componenti: Genome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 2LumenalSequence analysis2
Transmembranei3 – 23Helical; Note=Internal signal sequenceSequence analysisAdd BLAST21
Topological domaini24 – 36CytoplasmicSequence analysisAdd BLAST13
Transmembranei37 – 56HelicalSequence analysisAdd BLAST20
Topological domaini57 – 85LumenalSequence analysisAdd BLAST29

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host endoplasmic reticulum, Host membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003983091 – 85Double gene block protein 2Add BLAST85

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi10 – 15Poly-Leu6

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Sequencei

Sequence statusi: Complete.

Q7TD19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVLLVTGVL GLLLLIKWKS QSTSTSNQTC QCPTSPWVIY AFYNSLSLVL
60 70 80
LLCHLIPEIK PIHTSYNTHD SSKQQHISIN TGNGK
Length:85
Mass (Da):9,454
Last modified:October 5, 2010 - v2
Checksum:i8B6AA27966E04592
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural varianti6V → A in strain: Infectious clone UK. 1
Natural varianti29T → V in strain: Infectious clone UK. 1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M22445 Genomic RNA. Translation: AHZ65050.1.
AY312063 Genomic RNA. Translation: AAP78488.1.
RefSeqiYP_009029987.1. NC_003821.3.

Genome annotation databases

GeneIDi944389.
KEGGivg:944389.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M22445 Genomic RNA. Translation: AHZ65050.1.
AY312063 Genomic RNA. Translation: AAP78488.1.
RefSeqiYP_009029987.1. NC_003821.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi944389.
KEGGivg:944389.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiMP2_TCV
AccessioniPrimary (citable) accession number: Q7TD19
Secondary accession number(s): A0A024E2A8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 5, 2010
Last sequence update: October 5, 2010
Last modified: November 30, 2016
This is version 24 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.