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Q7T3H5 (Q7T3H5_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region269 – 2702Substrate binding By similarity PIRSR PIRSR000114-2

Sites

Active site2041Proton acceptor By similarity PIRSR PIRSR000114-1
Binding site1201Substrate By similarity PIRSR PIRSR000114-2

Sequences

Sequence LengthMass (Da)Tools
Q7T3H5 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: 43EFE27743393D0E

FASTA34938,179
        10         20         30         40         50         60 
MPGKKVCIIG SGNWGSAIAK IVGHNVKSSN RFEPLVKMWV YEEMIDGRKL TEIINTEHEN 

        70         80         90        100        110        120 
VKYLPGHKLP KTVVAVPDVT EAASGADFLI FVIPHQFIVR VCDQMKPHIK PGAIGISLIK 

       130        140        150        160        170        180 
GIDEGPDGLT LISDIIRAKL EIEVCVLMGA NIASEVADEK FCETTIGATN EASGKLFKEL 

       190        200        210        220        230        240 
LQTPNFRITV VKESDTVELC GALKNIVAVG AGFCDGLGFG DNTKAAVIRL GLMEMVAFSK 

       250        260        270        280        290        300 
LFCKSSVSSA TFLESCGVAD LITTCYGGRN RRVAEAFART QKSIVELEAE MLNGQKLQGP 

       310        320        330        340 
QTSAEVYKIL HKRNITDKFP LFVSVYQICF EGRQVKDFIN CLQNHPEHM 

« Hide

References

« Hide 'large scale' references
[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryo EMBL AAH53116.1.
[2]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000053638 Ensembl ENSDARP00000113739.
[3]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000053638 Ensembl ENSDARP00000113739.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CABZ01067085 Genomic DNA. No translation available.
CABZ01067086 Genomic DNA. No translation available.
CABZ01067087 Genomic DNA. No translation available.
CABZ01068181 Genomic DNA. No translation available.
CABZ01068182 Genomic DNA. No translation available.
CABZ01075159 Genomic DNA. No translation available.
CABZ01075160 Genomic DNA. No translation available.
CABZ01075161 Genomic DNA. No translation available.
CABZ01079940 Genomic DNA. No translation available.
CABZ01079941 Genomic DNA. No translation available.
CABZ01079942 Genomic DNA. No translation available.
CABZ01079943 Genomic DNA. No translation available.
CABZ01079950 Genomic DNA. No translation available.
CABZ01079951 Genomic DNA. No translation available.
CABZ01089718 Genomic DNA. No translation available.
CABZ01090314 Genomic DNA. No translation available.
CABZ01090315 Genomic DNA. No translation available.
CABZ01090434 Genomic DNA. No translation available.
CABZ01090435 Genomic DNA. No translation available.
CABZ01091117 Genomic DNA. No translation available.
CABZ01091118 Genomic DNA. No translation available.
CABZ01101716 Genomic DNA. No translation available.
CABZ01101717 Genomic DNA. No translation available.
CABZ01101718 Genomic DNA. No translation available.
CABZ01101719 Genomic DNA. No translation available.
CABZ01101720 Genomic DNA. No translation available.
CABZ01101985 Genomic DNA. No translation available.
CABZ01101986 Genomic DNA. No translation available.
CABZ01101987 Genomic DNA. No translation available.
CABZ01101988 Genomic DNA. No translation available.
CABZ01103845 Genomic DNA. No translation available.
CABZ01103846 Genomic DNA. No translation available.
CABZ01103847 Genomic DNA. No translation available.
CABZ01103848 Genomic DNA. No translation available.
CABZ01105353 Genomic DNA. No translation available.
CABZ01110638 Genomic DNA. No translation available.
CABZ01111719 Genomic DNA. No translation available.
CR548627 Genomic DNA. No translation available.
CU611039 Genomic DNA. No translation available.
CU633999 Genomic DNA. No translation available.
CU634003 Genomic DNA. No translation available.
BC053116 mRNA. Translation: AAH53116.1.
RefSeqNP_999918.1. NM_214753.1.
UniGeneDr.78758.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000053638.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000053639; ENSDARP00000053638; ENSDARG00000036942.
ENSDART00000134266; ENSDARP00000113739; ENSDARG00000036942.
GeneID406615.
KEGGdre:406615.

Organism-specific databases

CTD406615.
ZFINZDB-GENE-040426-2576. gpd1c.

Phylogenomic databases

eggNOGCOG0240.
GeneTreeENSGT00390000003114.
HOGENOMHOG000246855.
HOVERGENHBG003669.
InParanoidQ7T3H5.
KOK00006.
OMACKLLSTS.
OrthoDBEOG7ZKSBS.
TreeFamTF300836.

Family and domain databases

Gene3D1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11728. PTHR11728. 1 hit.
PfamPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSPR00077. GPDHDRGNASE.
SUPFAMSSF48179. SSF48179. 1 hit.
TIGRFAMsTIGR03376. glycerol3P_DH. 1 hit.
PROSITEPS00957. NAD_G3PDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20818161.

Entry information

Entry nameQ7T3H5_DANRE
AccessionPrimary (citable) accession number: Q7T3H5
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: June 11, 2014
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)