Q7T3D6 (Q7T3D6_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Zgc:63947 EMBL AAH53161.1

Gene names

ORF Names:

zgc:63947 ZFIN ZDB-GENE-040426-1306

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH53161.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	541 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	Cell surface proteoglycan that bears heparan sulfate By similarity. RuleBase RU003519
Subcellular location	Cell membrane; Lipid-anchor › GPI-anchor By similarity RuleBase RU003519.
Sequence similarities	Belongs to the glypican family. RuleBase RU003518

Ontologies

Keywords
Cellular component	Membrane
PTM	GPI-anchor RuleBase RU003519 Glycoprotein Heparan sulfate RuleBase RU003519 Lipoprotein Proteoglycan
Gene Ontology (GO)
Cellular component	anchored to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell proteinaceous extracellular matrix Inferred from electronic annotation. Source: InterPro
Molecular function	heparan sulfate proteoglycan binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q7T3D6 [UniParc]. Last modified October 1, 2003. Version 1. Checksum: 958D84545850F2C6	FASTA	541	60,716
	10 20 30 40 50 60 MGFVSLVLLC ALTGLVFGDN KPKTCSDIRL FYSNKGFNLN GVPQTEISGE HLRVCAQGYT 70 80 90 100 110 120 CCTSVMEENL LNLSRREFEM QVKESGRSLQ AKLNGQFKSF DEYFLELLNR SEASLQSSFQ 130 140 150 160 170 180 SGFGSLFSQM SKVFQDLFSD LRRYFRGSNV NLEEALNEFW ARLLDRLFKA LNPQYSIGEE 190 200 210 220 230 240 YLECVAKQSE KLKPFGETPR ELKTKITRTV IAARTFVQGL VISGEAVRKV SQVSLSTECV 250 260 270 280 290 300 RAVMKQTYCP HCSGVALAKP CSNYCRNVLK GCLANQADLD TEWRNLADAM LEVVDKLSRP 310 320 330 340 350 360 YSVDSVVLSL PKRIAEAILY MQDNQDMFIN KVFLECGTPA PSSNIQEQIK RGRNTAEEVS 370 380 390 400 410 420 STPGAQLERL LSDVSRMLRD MMQYWVHLPR KLCVDRESGP GESDRCWNGM SVGRYLPEVM 430 440 450 460 470 480 GDGLASQINN PEVEIDITKP DMAVRKQIMQ LKIMINRLKY AVNGNDVDFQ DTSDDISGSG 490 500 510 520 530 540 SGMCLDDQCS RGPRLMSPNT DKPKVYASPS ENKKVVNGRS SQNLPCISLY LLSLVTVLLR R

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Kidney EMBL AAH53161.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC053161 mRNA. Translation: AAH53161.1.
IPI	IPI00503096.
RefSeq	NP_957314.1. NM_201020.1.
UniGene	Dr.26461.
3D structure databases
ModBase	Search...
Proteomic databases
PRIDE	Q7T3D6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	393995.
KEGG	dre:393995.
Organism-specific databases
ZFIN	ZDB-GENE-040426-1306. zgc:63947.
Phylogenomic databases
eggNOG	fiNOG04824.
GeneTree	ENSGT00550000074430.
HOVERGEN	HBG003464.
InParanoid	Q7T3D6.
Gene expression databases
ArrayExpress	Q7T3D6.
Bgee	Q7T3D6.
Family and domain databases
InterPro	IPR001863. Glypican. IPR015502. Glypican-1. IPR019803. Glypican_CS. [Graphical view]
KO	K08107.
PANTHER	PTHR10822. Glypican. 1 hit. PTHR10822:SF8. Gpc1. 1 hit.
Pfam	PF01153. Glypican. 1 hit. [Graphical view]
PROSITE	PS01207. GLYPICAN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7T3D6_DANRE

Accession

Primary (citable) accession number: Q7T3D6

Entry history

Integrated into UniProtKB/TrEMBL:	October 1, 2003
Last sequence update:	October 1, 2003
Last modified:	November 16, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)