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Protein
Submitted name:

Upb1 protein

Gene

upb1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Upb1 proteinImported
Submitted name:
Ureidopropionase, betaImported
Gene namesi
Name:upb1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-030131-1380. upb1.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000002199.

Structurei

3D structure databases

ProteinModelPortaliQ7T395.
SMRiQ7T395. Positions 6-384.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini72 – 366295CN hydrolaseInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0808. Eukaryota.
COG0388. LUCA.
HOVERGENiHBG018848.
KOiK01431.
PhylomeDBiQ7T395.

Family and domain databases

Gene3Di3.60.110.10. 1 hit.
InterProiIPR003010. C-N_Hydrolase.
[Graphical view]
PfamiPF00795. CN_hydrolase. 1 hit.
[Graphical view]
SUPFAMiSSF56317. SSF56317. 1 hit.
PROSITEiPS50263. CN_HYDROLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7T395-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGKDFESLE KVLEAHLPEA ELKEARRLLF GKELKKLDLP RSAIDAAGQQ
60 70 80 90 100
DFDLKGYVFE ASPEQLRPPR MVRVGLIQNK IVLPTDAPVL EQITALHKRV
110 120 130 140 150
GEMVEVAAMC GVNIVCFQEA WTMPFAFCTR EREPWTEFAE SAEDGLTTRF
160 170 180 190 200
CIQLAKKHNM VVVSPILERD EIHGGTLWNT AVVVSNNGNV LGKTRKNHIP
210 220 230 240 250
RVGDFNESTY YMEGNTGHRV FQTQFGKIAV NICYGRHHPL NWLMYSVNGA
260 270 280 290 300
EIIFNPSATV GLLSEPMWPI EARNAAIANH CFTCAINRVG TEYFKNEFTS
310 320 330 340 350
GDGKKAHHDF GHFYGSSYMA APDGSRTPGL SRTRDGLLVA ELDLNLNRQV
360 370 380
ADKWNFKMTG RYEMYAEELK KAIQHDFKPN VMKD
Length:384
Mass (Da):43,327
Last modified:October 1, 2003 - v1
Checksum:i412ECD5B1EBE485B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC053204 mRNA. Translation: AAH53204.1.
BC164705 mRNA. Translation: AAI64705.1.
RefSeqiNP_955910.1. NM_199616.1.
UniGeneiDr.77306.

Genome annotation databases

GeneIDi322660.
KEGGidre:322660.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC053204 mRNA. Translation: AAH53204.1.
BC164705 mRNA. Translation: AAI64705.1.
RefSeqiNP_955910.1. NM_199616.1.
UniGeneiDr.77306.

3D structure databases

ProteinModelPortaliQ7T395.
SMRiQ7T395. Positions 6-384.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000002199.

Protocols and materials databases

DNASUi322660.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi322660.
KEGGidre:322660.

Organism-specific databases

CTDi51733.
ZFINiZDB-GENE-030131-1380. upb1.

Phylogenomic databases

eggNOGiKOG0808. Eukaryota.
COG0388. LUCA.
HOVERGENiHBG018848.
KOiK01431.
PhylomeDBiQ7T395.

Miscellaneous databases

NextBioi20807890.

Family and domain databases

Gene3Di3.60.110.10. 1 hit.
InterProiIPR003010. C-N_Hydrolase.
[Graphical view]
PfamiPF00795. CN_hydrolase. 1 hit.
[Graphical view]
SUPFAMiSSF56317. SSF56317. 1 hit.
PROSITEiPS50263. CN_HYDROLASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: KidneyImported.
  2. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: PCR rescueImported.

Entry informationi

Entry nameiQ7T395_DANRE
AccessioniPrimary (citable) accession number: Q7T395
Entry historyi
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 13, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.