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Protein

Protein CDV3 homolog

Gene

cdv3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein CDV3 homolog
Gene namesi
Name:cdv3
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437 Componenti: Chromosome 24

Organism-specific databases

ZFINiZDB-GENE-030131-6034. cdv3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 236235Protein CDV3 homologPRO_0000299564Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanineBy similarity

Keywords - PTMi

Acetylation

Proteomic databases

PRIDEiQ7T370.

Expressioni

Gene expression databases

BgeeiQ7T370.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000031228.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi19 – 5840Lys-richAdd
BLAST
Compositional biasi96 – 10611Poly-GluAdd
BLAST

Sequence similaritiesi

Belongs to the CDV3 family.Curated

Phylogenomic databases

eggNOGiNOG74324.
GeneTreeiENSGT00390000000805.
HOGENOMiHOG000007697.
HOVERGENiHBG063147.
InParanoidiQ7T370.
OMAiNEWKEFE.
OrthoDBiEOG7WX09Q.
PhylomeDBiQ7T370.
TreeFamiTF315891.

Family and domain databases

InterProiIPR026806. CDV3.
[Graphical view]
PANTHERiPTHR16284. PTHR16284. 1 hit.
PfamiPF15359. CDV3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q7T370-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADVAPAGVE KSLDDFFAKR DKKKKKEKGK GKEQVTGAAA AAAMPVKKMK
60 70 80 90 100
KEKEKSTKSE NQDAQMEKED EEWKEFEQKE VDYTGLRLQA MQMSDEKEEE
110 120 130 140 150
EYEKEEVGED GEIILVTSDK MSGPWNKSGG APPSAASAPV EEVEVPEPKA
160 170 180 190 200
PGVYRPPGAR LTTTKKAPAQ GPPEIFSDAQ FPSLLSTARH VETRKDREME
210 220 230
KTFEVVKHKS RVREGEGPGS MQQLQLDNQY AILGDK
Length:236
Mass (Da):26,229
Last modified:October 1, 2003 - v1
Checksum:iBD3D9DC8E4F46AFF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC053231 mRNA. Translation: AAH53231.1.
RefSeqiNP_997886.1. NM_212721.1.
UniGeneiDr.32980.

Genome annotation databases

EnsembliENSDART00000036204; ENSDARP00000031228; ENSDARG00000023028.
GeneIDi334102.
KEGGidre:334102.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC053231 mRNA. Translation: AAH53231.1.
RefSeqiNP_997886.1. NM_212721.1.
UniGeneiDr.32980.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000031228.

Proteomic databases

PRIDEiQ7T370.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000036204; ENSDARP00000031228; ENSDARG00000023028.
GeneIDi334102.
KEGGidre:334102.

Organism-specific databases

CTDi55573.
ZFINiZDB-GENE-030131-6034. cdv3.

Phylogenomic databases

eggNOGiNOG74324.
GeneTreeiENSGT00390000000805.
HOGENOMiHOG000007697.
HOVERGENiHBG063147.
InParanoidiQ7T370.
OMAiNEWKEFE.
OrthoDBiEOG7WX09Q.
PhylomeDBiQ7T370.
TreeFamiTF315891.

Miscellaneous databases

NextBioi20810264.
PROiQ7T370.

Gene expression databases

BgeeiQ7T370.

Family and domain databases

InterProiIPR026806. CDV3.
[Graphical view]
PANTHERiPTHR16284. PTHR16284. 1 hit.
PfamiPF15359. CDV3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Kidney.

Entry informationi

Entry nameiCDV3_DANRE
AccessioniPrimary (citable) accession number: Q7T370
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: October 1, 2003
Last modified: July 22, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.