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Protein
Submitted name:

Pyruvate dehydrogenase (Lipoamide) beta

Gene

pdhb

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • pyruvate dehydrogenase activity Source: ZFIN

GO - Biological processi

  • pigmentation Source: ZFIN

Keywordsi

LigandPyruvateImported

Enzyme and pathway databases

ReactomeiR-DRE-204174 Regulation of pyruvate dehydrogenase (PDH) complex
R-DRE-389661 Glyoxylate metabolism and glycine degradation
R-DRE-5362517 Signaling by Retinoic Acid
R-DRE-70268 Pyruvate metabolism

Names & Taxonomyi

Protein namesi
Submitted name:
Pyruvate dehydrogenase (Lipoamide) betaImported
Submitted name:
Pyruvate dehydrogenase E1 beta subunitImported
Gene namesi
Name:pdhbImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 22

Organism-specific databases

ZFINiZDB-GENE-040426-2173 pdhb

Expressioni

Gene expression databases

BgeeiENSDARG00000021346

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000002122

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 208Transket_pyrInterPro annotationAdd BLAST176

Phylogenomic databases

eggNOGiKOG0524 Eukaryota
COG0022 LUCA
GeneTreeiENSGT00530000063423
HOGENOMiHOG000281450
HOVERGENiHBG000917
KOiK00162
OMAiSRMRHHC
OrthoDBiEOG091G0D37
TreeFamiTF105674

Family and domain databases

Gene3Di3.40.50.920, 1 hit
InterProiView protein in InterPro
IPR029061 THDP-binding
IPR009014 Transketo_C/PFOR_II
IPR005475 Transketolase-like_Pyr-bd
IPR033248 Transketolase_C
PfamiView protein in Pfam
PF02779 Transket_pyr, 1 hit
PF02780 Transketolase_C, 1 hit
SMARTiView protein in SMART
SM00861 Transket_pyr, 1 hit
SUPFAMiSSF52518 SSF52518, 1 hit
SSF52922 SSF52922, 1 hit

Sequencei

Sequence statusi: Complete.

Q7T368-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASLRCFLRS GKSAVSAVLR REFHRTPPAA VQVTVRDALN QAMDEELERD
60 70 80 90 100
ERVFLLGEEV AQYDGAYKVS RGLWKKYGDK RIIDTPITEM GFAGIAVGAA
110 120 130 140 150
MAGLRPICEF MTFNFSMQAI DQVINSAAKT YYMSAGLQAV PIVFRGPNGA
160 170 180 190 200
SAGVAAQHSQ CFAAWYGHCP GLKVLSPWNS EDARGLLKAA IRDDNPVVFL
210 220 230 240 250
ENELMYGVPF EMSEEVQSKD FVIPIGKAKI ERQGNHITLV SHSRMVGLCL
260 270 280 290 300
DAAAVLAKEG IECEVINLRS IRPLDADTIE TSITKTNHLV TVEGGWPQFG
310 320 330 340 350
VGAEILARIM EGPAFNYLDA PAVRVTGVDI PMPYAKILED NSIPQIKDII

FSVKKTLNV
Length:359
Mass (Da):39,308
Last modified:October 1, 2003 - v1
Checksum:i06B31C8784F75DE4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX649457 Genomic DNA No translation available.
BC053233 mRNA Translation: AAH53233.1
RefSeqiNP_998319.1, NM_213154.1
UniGeneiDr.3570

Genome annotation databases

EnsembliENSDART00000006513; ENSDARP00000002122; ENSDARG00000021346
GeneIDi406428
KEGGidre:406428

Similar proteinsi

Entry informationi

Entry nameiQ7T368_DANRE
AccessioniPrimary (citable) accession number: Q7T368
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: March 28, 2018
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health