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Q7SYL6 (Q7SYL6_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Amylase, alpha 2A; pancreatic EMBL AAH54669.1
Gene names
Name:amy2a ZFIN ZDB-GENE-040426-2393
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH54669.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length512 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. SAAS SAAS006589

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
Q7SYL6 [UniParc].

Last modified October 1, 2003. Version 1.
Checksum: FE97E8116045AFD2

FASTA51256,879
        10         20         30         40         50         60 
MKLLILAALV GLSLAQFDPN TKSGRTAIVH LFEWRWADIA AECERYLGPN GFGGVQISPP 

        70         80         90        100        110        120 
SESIVVTNPW HPWWQRYQPI GYNLCSRSGN ENELKDMITR CNNVGVNIYV DAVINHMCGS 

       130        140        150        160        170        180 
GGGSGTHSSC GSYFNANNKD FPTVPYSNLD FSDGKCNTGS GNIENYQDIN QVRNCRLVGL 

       190        200        210        220        230        240 
LDLALEKDYV RSKVADYMNK LIDMGVAGFR VDACKHMWPG DLSAVYGRLH NLNTRWFPSG 

       250        260        270        280        290        300 
AKPFIFQEVI DLGGEPITSS EYTGIGRVTE FKYGAKLGNI IRKWNGEKLS YLKNWGEGWG 

       310        320        330        340        350        360 
SMPSDKALVF VDNHDNQRGH GAGGASIVTF WDARLYKMAV GFMLAHPYGF TRVMSSYRWD 

       370        380        390        400        410        420 
RNIVNGQDQN DWIGPPSNGD GSTKPVPINP DSTCGDNWVC EHRWRQIKNM VIFRNVVNGQ 

       430        440        450        460        470        480 
PFSNWWDNGS NQIAFSRGSR GFIIINNDDW ELNVSLSTGL PGGTYCDVIS GQKENGRCTG 

       490        500        510 
KEVNVGGDGK ASFRISNQEE DPFMAIHADS KL

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References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Whole body EMBL AAH54669.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC054669 mRNA. Translation: AAH54669.1.
IPIIPI00506555.
RefSeqNP_998176.1. NM_213011.1.
UniGeneDr.77109.

3D structure databases

HSSPHSSP built from PDB template 1UA3 based on UniProtKB P00690.
ProteinModelPortalQ7SYL6.
SMRQ7SYL6. Positions 16-512.
ModBaseSearch...

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID406539.
KEGGdre:406539.

Organism-specific databases

CTD279.
ZFINZDB-GENE-040426-2393. amy2a.

Phylogenomic databases

HOVERGENHBG000061.
InParanoidQ7SYL6.
KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Other

NextBio20818104.

Entry information

Entry nameQ7SYL6_DANRE
AccessionPrimary (citable) accession number: Q7SYL6
Entry history
Integrated into UniProtKB/TrEMBL: October 1, 2003
Last sequence update: October 1, 2003
Last modified: April 3, 2013
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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