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Protein

ADP-ribosylation factor-like protein 2-binding protein

Gene

arl2bp

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Plays a role as an effector of the ADP-ribosylation factor-like protein 2, ARL2.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
ADP-ribosylation factor-like protein 2-binding protein
Short name:
ARF-like 2-binding protein
Gene namesi
Name:arl2bp
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Unplaced

Organism-specific databases

ZFINiZDB-GENE-040426-1604. arl2bp.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell projection, Cilium, Cytoplasm, Cytoskeleton, Mitochondrion, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 168168ADP-ribosylation factor-like protein 2-binding proteinPRO_0000287119Add
BLAST

Proteomic databases

PaxDbiQ7SYL1.

Expressioni

Gene expression databases

BgeeiQ7SYL1.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000110496.

Structurei

Secondary structure

1
168
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi22 – 3413Combined sources
Helixi38 – 5316Combined sources
Helixi65 – 8521Combined sources
Beta strandi90 – 923Combined sources
Helixi96 – 1005Combined sources
Helixi104 – 1063Combined sources
Helixi109 – 1168Combined sources
Helixi117 – 1193Combined sources
Helixi121 – 13616Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K0SNMR-A19-139[»]
ProteinModelPortaliQ7SYL1.
SMRiQ7SYL1. Positions 19-139.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ7SYL1.

Family & Domainsi

Sequence similaritiesi

Belongs to the ARL2BP family.Curated

Phylogenomic databases

eggNOGiENOG410IKTQ. Eukaryota.
ENOG4111IGT. LUCA.
HOVERGENiHBG105565.
InParanoidiQ7SYL1.
PhylomeDBiQ7SYL1.

Family and domain databases

Gene3Di1.20.1520.10. 1 hit.
InterProiIPR023379. ARF-like_2-bdp_dom.
[Graphical view]
PfamiPF11527. ARL2_Bind_BART. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7SYL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVDMQSLDEE DFSVSKSSDA DAEFDIVIGN IEDIIMEDEF QHLQQSFMEK
60 70 80 90 100
YYLEFDDSEE NKLSYTPIFN EYIEILEKHL EQQLVERIPG FNMDAFTHSL
110 120 130 140 150
KQHKDEVSGD ILDMLLTFTD FMAFKEMFTD YRAEKEGRGL DLSTGLVVKS
160
LNSSSASPLT PSMASQSI
Length:168
Mass (Da):19,296
Last modified:May 15, 2007 - v2
Checksum:i90ACE22CF1130535
GO

Sequence cautioni

The sequence AAH54678.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence AAH66483.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC054678 mRNA. Translation: AAH54678.1. Different initiation.
BC066483 mRNA. Translation: AAH66483.2. Different initiation.
RefSeqiXP_009291821.1. XM_009293546.1.
UniGeneiDr.110760.

Genome annotation databases

GeneIDi393976.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC054678 mRNA. Translation: AAH54678.1. Different initiation.
BC066483 mRNA. Translation: AAH66483.2. Different initiation.
RefSeqiXP_009291821.1. XM_009293546.1.
UniGeneiDr.110760.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K0SNMR-A19-139[»]
ProteinModelPortaliQ7SYL1.
SMRiQ7SYL1. Positions 19-139.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000110496.

Proteomic databases

PaxDbiQ7SYL1.

Protocols and materials databases

DNASUi393976.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi393976.

Organism-specific databases

CTDi23568.
ZFINiZDB-GENE-040426-1604. arl2bp.

Phylogenomic databases

eggNOGiENOG410IKTQ. Eukaryota.
ENOG4111IGT. LUCA.
HOVERGENiHBG105565.
InParanoidiQ7SYL1.
PhylomeDBiQ7SYL1.

Miscellaneous databases

EvolutionaryTraceiQ7SYL1.
NextBioi20814947.
PROiQ7SYL1.

Gene expression databases

BgeeiQ7SYL1.

Family and domain databases

Gene3Di1.20.1520.10. 1 hit.
InterProiIPR023379. ARF-like_2-bdp_dom.
[Graphical view]
PfamiPF11527. ARL2_Bind_BART. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Kidney.

Entry informationi

Entry nameiAR2BP_DANRE
AccessioniPrimary (citable) accession number: Q7SYL1
Secondary accession number(s): Q6NYS0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: May 15, 2007
Last modified: December 9, 2015
This is version 77 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Caution

It is uncertain whether Met-1 or Met-4 is the initiator.Curated

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.