Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha-amylase

Gene

gh13-1

Organism
Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:gh13-1Imported
ORF Names:NCU08131Imported
OrganismiNeurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)Imported
Taxonomic identifieri367110 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesSordariaceaeNeurospora
ProteomesiUP000001805 Componenti: Chromosome 7, Linkage Group VII

Organism-specific databases

EuPathDBiFungiDB:NCU08131.

Interactioni

Protein-protein interaction databases

STRINGi5141.NCU08131.1.

Structurei

3D structure databases

ProteinModelPortaliQ7S4K0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000165530.
InParanoidiQ7S4K0.
KOiK01176.
OMAiHDMPRFA.
OrthoDBiEOG7RBZJ4.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015340. A_amylase_DUF1966_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q7S4K0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSSLLTGAI AAALSFSGYA AAADADAWKS RSIYQVMIDR FARDDGGSVD
60 70 80 90 100
CKLYEFCGGT WKGLTNKLDY IQGMGFDAIQ ISPVIKNEDK NTAVGEPYHG
110 120 130 140 150
YWSQDLTQVN PKFGTEEDLK NLIAEIHKRD MFLMVDVVVN HMAQEFDNVV
160 170 180 190 200
PPKVDYSVFK PFNDKKYFHP YCNVTEWENA TNIQDCWLYP YGIALADLKT
210 220 230 240 250
ESPDVVSLFT KWIKNLVSTY SIDGLRIDAA KHVNDEFLPQ FVQASGVFAL
260 270 280 290 300
GEVLTGVTED MCRYQNKSKN LLPGMPNYLD YYPLNAAFNG GSFERLGEIR
310 320 330 340 350
AQAQDSCNDT LALGTFIENH DMPRFASQNQ DMALAKNAMT YVIMNDGIPT
360 370 380 390 400
VYQGQEQHFT GGATPENREP LWKSNYNTSA PLYVLAQTLN KVRKNAIKQS
410 420 430 440 450
PTYVKQTSNV LIADTNHFCQ QKGPAENSVV FCVTNKSSKG DSYQMPVGGF
460 470 480 490 500
RDSDEVVEVL SCATTTADGL GQITAYMGAG EPKVWVKKSA LEGTDICTKT
510 520 530
TVDGPKEENG AVSKGAATGV LMAAVLGTAS LLL
Length:533
Mass (Da):58,657
Last modified:December 15, 2003 - v1
Checksum:i7390701DA36C4006
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM002242 Genomic DNA. Translation: EAA30438.1.
RefSeqiXP_959674.1. XM_954581.3.
UniGeneiNcr.12151.

Genome annotation databases

EnsemblFungiiEFNCRT00000008325; EFNCRP00000008311; EFNCRG00000008311.
GeneIDi3875826.
KEGGincr:NCU08131.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM002242 Genomic DNA. Translation: EAA30438.1.
RefSeqiXP_959674.1. XM_954581.3.
UniGeneiNcr.12151.

3D structure databases

ProteinModelPortaliQ7S4K0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5141.NCU08131.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiEFNCRT00000008325; EFNCRP00000008311; EFNCRG00000008311.
GeneIDi3875826.
KEGGincr:NCU08131.

Organism-specific databases

EuPathDBiFungiDB:NCU08131.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000165530.
InParanoidiQ7S4K0.
KOiK01176.
OMAiHDMPRFA.
OrthoDBiEOG7RBZJ4.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015340. A_amylase_DUF1966_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09260. DUF1966. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of the filamentous fungus Neurospora crassa."
    Galagan J.E., Calvo S.E., Borkovich K.A., Selker E.U., Read N.D., Jaffe D.B., FitzHugh W., Ma L.-J., Smirnov S., Purcell S., Rehman B., Elkins T., Engels R., Wang S., Nielsen C.B., Butler J., Endrizzi M., Qui D.
    , Ianakiev P., Bell-Pedersen D., Nelson M.A., Werner-Washburne M., Selitrennikoff C.P., Kinsey J.A., Braun E.L., Zelter A., Schulte U., Kothe G.O., Jedd G., Mewes H.-W., Staben C., Marcotte E., Greenberg D., Roy A., Foley K., Naylor J., Stange-Thomann N., Barrett R., Gnerre S., Kamal M., Kamvysselis M., Mauceli E.W., Bielke C., Rudd S., Frishman D., Krystofova S., Rasmussen C., Metzenberg R.L., Perkins D.D., Kroken S., Cogoni C., Macino G., Catcheside D.E.A., Li W., Pratt R.J., Osmani S.A., DeSouza C.P.C., Glass N.L., Orbach M.J., Berglund J.A., Voelker R., Yarden O., Plamann M., Seiler S., Dunlap J.C., Radford A., Aramayo R., Natvig D.O., Alex L.A., Mannhaupt G., Ebbole D.J., Freitag M., Paulsen I., Sachs M.S., Lander E.S., Nusbaum C., Birren B.W.
    Nature 422:859-868(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987Imported.

Entry informationi

Entry nameiQ7S4K0_NEUCR
AccessioniPrimary (citable) accession number: Q7S4K0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: April 29, 2015
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.