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Q7RPC6 (Q7RPC6_PLAYO) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
DNA ligase RuleBase RU000617

EC=6.5.1.1 RuleBase RU000617
Gene names
ORF Names:PY01533 EMBL EAA20874.1
OrganismPlasmodium yoelii yoelii [Reference proteome] EMBL EAA20874.1
Taxonomic identifier73239 [NCBI]
Taxonomic lineageEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Vinckeia)

Protein attributes

Sequence length826 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EAA20874.1

Sequences

Sequence LengthMass (Da)Tools
Q7RPC6 [UniParc].

Last modified December 15, 2003. Version 1.
Checksum: 32E37316CE828FAE

FASTA82693,736
        10         20         30         40         50         60 
MDGDEQCDTK IEESHVKSEE KEASKRKNTN DDGAKTKKSK VKNENEIKKG SLFNCKVYED 

        70         80         90        100        110        120 
EKISDLSSPK FNPANFDISN LCLSEKDKIK HKFKDSLLFT FLTNTFNQIE ELKGSGAGSK 

       130        140        150        160        170        180 
KNVAIILSNV FRVLIYYSPN DLIPAVYITL NKVAPDYQNV EAGVGEALIL KTMSEAYSRT 

       190        200        210        220        230        240 
EASIKKDLQQ IEDLGIIAES CSCKMRTIFP LPRLTIQSVF NELKSIPNIS GSNSQQKKRE 

       250        260        270        280        290        300 
VIKKLLVSAK TSEAKYIVRF LQQRLRIGVN SATVLQALAY AFVLTRPEIP ENIIKDGKMM 

       310        320        330        340        350        360 
NEKLLNERIV VKGDKDNCDD DATEVKNENN IKLEKTNDTD NKTNVLDTDQ FNNLVKSIKI 

       370        380        390        400        410        420 
RNERMSKPNL FFNIGKEGDT RLLPIFKELK NAYCDINNDS DIFECMEKSV KSALCELPNI 

       430        440        450        460        470        480 
EMIIQNLLSG DDMNVLMKKC TVKTGVPVQP MLAKPTKGIQ EVLDRFNNVT FTCEYKYDGE 

       490        500        510        520        530        540 
RAQIHYIDKD NIKIFSRNLE TMTEKYPDVI QIVKDQIMPG VTESIIDSEV VAYDIENKKI 

       550        560        570        580        590        600 
LPFQILTTRK RKDVDIENIK VKICLFPFDL ICCNGVPVIK EPLEIRRKLL YSLLRCKEGV 

       610        620        630        640        650        660 
LEYATHSEMN NIDDIDIFLQ DAIENNCEGL MVKTLLDNAS YEPSRRSLNW LKVKKDYIEG 

       670        680        690        700        710        720 
LSDSVDLVPI AGYYGKGKRS GVYGAFVLAA YNSETENFQT VCKAGTGFSD EILNALHESL 

       730        740        750        760        770        780 
SDKIIPNKKS YYEVSDKLNP DVWFDAHYVW EIKAADLSLS PVHTAAIGVY SDDKGIGLRF 

       790        800        810        820 
PRFLRLRDDK NPEQATTAQQ IVEFYEAQFA SNKNKNNNYN DESGSE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AABL01000407 Genomic DNA. Translation: EAA20874.1.
RefSeqXP_729309.1. XM_724216.1.

3D structure databases

ProteinModelPortalQ7RPC6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING73239.Q7RPC6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3801864.
KEGGpyo:PY01533.

Organism-specific databases

EuPathDBPlasmoDB:PY01533.

Phylogenomic databases

eggNOGCOG1793.
KOK10747.

Family and domain databases

Gene3D1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ7RPC6_PLAYO
AccessionPrimary (citable) accession number: Q7RPC6
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: July 9, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)