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Protein

ABC transporter G family member 39

Gene

ABCG39

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

May be a general defense protein.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi208 – 215ATP 1PROSITE-ProRule annotation8
Nucleotide bindingi898 – 905ATP 2PROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

  • drug transmembrane transport Source: TAIR
  • response to reactive oxygen species Source: TAIR

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Protein family/group databases

TCDBi3.A.1.205.22 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter G family member 39
Short name:
ABC transporter ABCG.39
Short name:
AtABCG39
Alternative name(s):
Pleiotropic drug resistance protein 11
Gene namesi
Name:ABCG39
Synonyms:PDR11, PDR13
Ordered Locus Names:At1g66950
ORF Names:F1O19.3, T4O24.9
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G66950
TAIRilocus:2019693 AT1G66950

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei544 – 564HelicalSequence analysisAdd BLAST21
Transmembranei584 – 604HelicalSequence analysisAdd BLAST21
Transmembranei623 – 643HelicalSequence analysisAdd BLAST21
Transmembranei663 – 683HelicalSequence analysisAdd BLAST21
Transmembranei689 – 709HelicalSequence analysisAdd BLAST21
Transmembranei716 – 736HelicalSequence analysisAdd BLAST21
Transmembranei775 – 795HelicalSequence analysisAdd BLAST21
Transmembranei1199 – 1219HelicalSequence analysisAdd BLAST21
Transmembranei1231 – 1251HelicalSequence analysisAdd BLAST21
Transmembranei1285 – 1303HelicalCuratedAdd BLAST19
Transmembranei1312 – 1332HelicalSequence analysisAdd BLAST21
Transmembranei1342 – 1362HelicalSequence analysisAdd BLAST21
Transmembranei1367 – 1387HelicalSequence analysisAdd BLAST21
Transmembranei1423 – 1443HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002346381 – 1454ABC transporter G family member 39Add BLAST1454

Proteomic databases

PaxDbiQ7PC84
PRIDEiQ7PC84

Expressioni

Gene expression databases

ExpressionAtlasiQ7PC84 baseline and differential
GenevisibleiQ7PC84 AT

Interactioni

Protein-protein interaction databases

BioGridi28234, 1 interactor
STRINGi3702.AT1G66950.1

Structurei

3D structure databases

ProteinModelPortaliQ7PC84
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 448ABC transporter 1PROSITE-ProRule annotationAdd BLAST274
Domaini526 – 739ABC transmembrane type-2 1CuratedAdd BLAST214
Domaini853 – 1106ABC transporter 2PROSITE-ProRule annotationAdd BLAST254
Domaini1178 – 1392ABC transmembrane type-2 2CuratedAdd BLAST215

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0065 Eukaryota
COG0842 LUCA
HOGENOMiHOG000238051
InParanoidiQ7PC84
OMAiIYSSTFW
OrthoDBiEOG09360089
PhylomeDBiQ7PC84

Family and domain databases

CDDicd03232 ABCG_PDR_domain2, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR013525 ABC_2_trans
IPR029481 ABC_trans_N
IPR003439 ABC_transporter-like
IPR034003 ABCG_PDR_2
IPR027417 P-loop_NTPase
IPR013581 PDR_assoc
PfamiView protein in Pfam
PF01061 ABC2_membrane, 2 hits
PF00005 ABC_tran, 2 hits
PF14510 ABC_trans_N, 1 hit
PF08370 PDR_assoc, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS50893 ABC_TRANSPORTER_2, 2 hits

Sequencei

Sequence statusi: Complete.

Q7PC84-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAMLGRDED PVGALSGRVS LASTSHRSLV GASKSFRDVF MPQTDEVFGR
60 70 80 90 100
SERREEDDME LRWAAIERLP TFDRLRKGML PQTSANGKIE LEDIDLTRLE
110 120 130 140 150
PKDKKHLMEM ILSFVEEDNE KFLRDLRERT DRVGIEVPKI EVRYENISVE
160 170 180 190 200
GDVRSASRAL PTLFNVTLNT LESILGFFHL LPSKRKKIQI LKDISGIVKP
210 220 230 240 250
SRMTLLLGPP SSGKTTLLQA LAGKLDDTLQ MSGRITYCGH EFREFVPQKT
260 270 280 290 300
CAYISQHDLH FGEMTVREIL DFSGRCLGVG SRYQLMSELS RREKEEGIKP
310 320 330 340 350
DPKIDAFMKS IAISGQETSL VTDYVLKILG LDICADILAG DVMRRGISGG
360 370 380 390 400
QKKRLTTGEM LVGPARALFM DEISTGLDSS TTFQICKFMR QLVHISDVTM
410 420 430 440 450
IISLLQPAPE TFELFDDIIL LSEGQIVYQG PRDNVLEFFE YFGFQCPERK
460 470 480 490 500
GVADFLQEVT SKKDQEQYWN KREQPYNYVS VSDFSSGFST FHTGQKLTSE
510 520 530 540 550
FRVPYDKAKT HSAALVTQKY GISNWELFKA CFDREWLLMK RNSFVYVFKT
560 570 580 590 600
VQITIMSLIT MTVYLRTEMH VGTVRDGQKF YGAMFFSLIN VMFNGLAELA
610 620 630 640 650
FTVMRLPVFY KQRDFLFYPP WAFALPAWLL KIPLSLIESG IWIGLTYYTI
660 670 680 690 700
GFAPSAARFF RQLLAYFCVN QMALSLFRFL GAIGRTEVIS NSIGTFTLLI
710 720 730 740 750
VFTLGGFIIA KDDIRPWMTW AYYMSPMMYG QTAIVMNEFL DERWSSPNYD
760 770 780 790 800
TRINAKTVGE VLLKSRGFFT EPYWFWICIV ALLGFSLLFN LFYILALMYL
810 820 830 840 850
NPLGNSKATV VEEGKDKQKG ENRGTEGSVV ELNSSSNKGP KRGMVLPFQP
860 870 880 890 900
LSLAFNNVNY YVDMPSEMKA QGVEGDRLQL LRDVGGAFRP GILTALVGVS
910 920 930 940 950
GAGKTTLMDV LAGRKTGGYI EGSISISGYP KNQTTFARVS GYCEQNDIHS
960 970 980 990 1000
PHVTVYESLI YSAWLRLSTD IDIKTRELFV EEVMELVELK PLRNSIVGLP
1010 1020 1030 1040 1050
GVDGLSTEQR KRLTIAVELV ANPSIIFMDE PTSGLDARAA AIVMRTVRNT
1060 1070 1080 1090 1100
VDTGRTVVCT IHQPSIDIFE SFDELLLMKR GGQVIYAGSL GHHSQKLVEY
1110 1120 1130 1140 1150
FEAVEGVPKI NDGYNPATWM LDVTTPSMES QMSLDFAQIF SNSSLYRRNQ
1160 1170 1180 1190 1200
ELIKDLSTPP PGSKDVYFKT KYAQSFSTQT KACFWKQYWS YWRHPQYNAI
1210 1220 1230 1240 1250
RFLMTVVIGV LFGLIFWQIG TKTENEQDLN NFFGAMYAAV LFLGALNAAT
1260 1270 1280 1290 1300
VQPAIAIERT VFYREKAAGM YSAIPYAISQ VAVEIMYNTI QTGVYTLILY
1310 1320 1330 1340 1350
SMIGCNWTMA KFLWFYYYML TSFIYFTLYG MMLMALTPNY QIAGICMSFF
1360 1370 1380 1390 1400
LSLWNLFSGF LIPRPQIPIW WRWYYWATPV AWTLYGLITS QVGDKDSMVH
1410 1420 1430 1440 1450
ISGIGDIDLK TLLKEGFGFE HDFLPVVAVV HIAWILLFLF VFAYGIKFLN

FQRR
Length:1,454
Mass (Da):165,193
Last modified:December 15, 2003 - v1
Checksum:i23780923FFB35DF5
GO

Sequence cautioni

The sequence AAF98206 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAG50592 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007152 Genomic DNA Translation: AAF98206.1 Sequence problems.
AC083891 Genomic DNA Translation: AAG50592.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE34577.1
BK001010 Genomic DNA Translation: DAA00879.1
PIRiD96693
RefSeqiNP_176867.2, NM_105366.4
UniGeneiAt.35712

Genome annotation databases

EnsemblPlantsiAT1G66950.1; AT1G66950.1; AT1G66950
GeneIDi843013
GrameneiAT1G66950.1; AT1G66950.1; AT1G66950
KEGGiath:AT1G66950

Similar proteinsi

Entry informationi

Entry nameiAB39G_ARATH
AccessioniPrimary (citable) accession number: Q7PC84
Secondary accession number(s): Q9C623, Q9FZI3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: December 15, 2003
Last modified: April 25, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health