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Protein

Superoxide dismutase

Gene

sodB1

Organism
Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi74Divalent metal cationUniRule annotation1
Metal bindingi157Divalent metal cationUniRule annotation1
Metal bindingi161Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodB1Imported
Ordered Locus Names:CV_2504Imported
OrganismiChromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)Imported
Taxonomic identifieri243365 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesChromobacteriaceaeChromobacterium
Proteomesi
  • UP000001424 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243365.CV_2504

Structurei

3D structure databases

ProteinModelPortaliQ7NV42
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 81Sod_Fe_NInterPro annotationAdd BLAST80
Domaini89 – 189Sod_Fe_CInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiKWGSFDK
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

Q7NV42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEHKLPELPY ALDALAPHIS KETLEFHYGK HHQTYITNLN NLIKGTEFEN
60 70 80 90 100
ASLEEIVKKS SGGIFNNAAQ VWNHTFYWFG LAPNAGGQPT GALADAINAK
110 120 130 140 150
WGSFDEFKKA FTQTAIGTFG SGWAWLVKNS DGSLDLVSTS NAATPLTTDK
160 170 180 190
KPLLTCDVWE HAYYIDYRNS RPNYLEHFWA LVNWDFVAKN FA
Length:192
Mass (Da):21,590
Last modified:December 15, 2003 - v1
Checksum:i5F70C6A786C612A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016825 Genomic DNA Translation: AAQ60175.1
RefSeqiWP_011136051.1, NC_005085.1

Genome annotation databases

EnsemblBacteriaiAAQ60175; AAQ60175; CV_2504
GeneIDi24948020
KEGGicvi:CV_2504

Similar proteinsi

Entry informationi

Entry nameiQ7NV42_CHRVO
AccessioniPrimary (citable) accession number: Q7NV42
Entry historyiIntegrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: March 28, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health