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Protein
Submitted name:

Type III secretion system EscC protein

Gene

escC

Organism
Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciCVIO243365:GHUD-2655-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion system EscC proteinImported
Gene namesi
Name:escCImported
Ordered Locus Names:CV_2597Imported
OrganismiChromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)Imported
Taxonomic identifieri243365 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesChromobacteriaceaeChromobacterium
Proteomesi
  • UP000001424 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 495474Sequence analysisPRO_5004289076Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi243365.CV_2597.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini179 – 27092Secretin_NInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili154 – 17724Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000245123.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7NUV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRASKWLGPG LVALTCAQAF AAIPWQSSAP FFLSTRGSKL ADVLRDLGAN
60 70 80 90 100
YSVPVVVSKQ VDEPFIGAIR SMPPEQALDQ LARLHKLAWY YDGQAIYVYK
110 120 130 140 150
AQEVSSQLIT PAYLQVSTLI SQLQGSGILD RRYCRVRAVP ASNAMEVHGV
160 170 180 190 200
PICLNRVEQL AKRIDEQKLN HEQNQEIIQL FPLKYATAAD GSYSYRGQQV
210 220 230 240 250
AVPGVVSVLK DMAQGRTLPL KENQGQQPPT DRSLPMFSAD PRQNAVIVRD
260 270 280 290 300
RKINMPLYAS LIEQFDRKPA LIEVSVMIID VNSQDLSALG IDWSASASIG
310 320 330 340 350
GNGISFNSAG QQGSDNFSTV ISNTGGFMVK LNALQQKAKA QILSRPSVVT
360 370 380 390 400
LDNTQAVLDR NITFYTKLLA EKVAKLESIS TGSLLRVTPR LVDEGGQRNV
410 420 430 440 450
MLTLVIQDGR QAGTVSQHEP LPQTLNAEVS TQTLLKAGQS LLLGGFVQDE
460 470 480 490
HSEGESKIPL LGDIPLIGKL FRSTQKNSRS TVRLFLIKAE PAVQS
Length:495
Mass (Da):54,035
Last modified:December 15, 2003 - v1
Checksum:i498D7D26F6C72019
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016825 Genomic DNA. Translation: AAQ60267.1.
RefSeqiWP_011136144.1. NC_005085.1.

Genome annotation databases

EnsemblBacteriaiAAQ60267; AAQ60267; CV_2597.
GeneIDi24948489.
KEGGicvi:CV_2597.
PATRICi21439936. VBIChrVio67196_2521.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016825 Genomic DNA. Translation: AAQ60267.1.
RefSeqiWP_011136144.1. NC_005085.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243365.CV_2597.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAQ60267; AAQ60267; CV_2597.
GeneIDi24948489.
KEGGicvi:CV_2597.
PATRICi21439936. VBIChrVio67196_2521.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
HOGENOMiHOG000245123.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Enzyme and pathway databases

BioCyciCVIO243365:GHUD-2655-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability."
    Vasconcelos A.T.R., de Almeida D.F., Almeida F.C., de Almeida L.G.P., de Almeida R., Goncalves J.A.A., Andrade E.M., Antonio R.V., Araripe J., de Araujo M.F.F., Filho S.A., Azevedo V., Batista A.J., Bataus L.A.M., Batista J.S., Belo A., vander Berg C., Blamey J.
    , Bogo M., Bonato S., Bordignon J., Brito C.A., Brocchi M., Burity H.A., Camargo A.A., Cardoso D.D.P., Carneiro N.P., Carraro D.M., Carvalho C.M.B., Cascardo J.C.M., Cavada B.S., Chueire L.M.O., Pasa T.B.C., Duran N., Fagundes N., Falcao C.L., Fantinatti F., Farias I.P., Felipe M.S.S., Ferrari L.P., Ferro J.A., Ferro M.I.T., Franco G.R., Freitas N.S.A., Furlan L.R., Gazzinelli R.T., Gomes E.A., Goncalves P.R., Grangeiro T.B., Grattapaglia D., Grisard E.C., Guimaraes C.T., Hanna E.S., Hungria M., Jardim S.N., Laurino J., Leoi L.C.T., Fassarella L., Lima A., Loureiro M.F., Lyra M.C.P., Macedo M., Madeira H.M.F., Manfio G.P., Maranhao A.Q., Martins W.S., di Mauro S.M.Z., de Medeiros S.R.B., Meissner R.D.V., Menck C.F.M., Moreira M.A.M., Nascimento F.F., Nicolas M.F., Oliveira J.G., Oliveira S.C., Paixao R.F.C., Parente J.A., Pedrosa F.O., Pena S.J.D., Perreira J.O., Perreira M., Pinto L.S.R.C., Pinto L.S., Porto J.I.R., Potrich D.P., Neto C.E.R., Reis A.M.M., Rigo L.U., Rondinelli E., dos Santos E.B.P., Santos F.R., Schneider M.P.C., Seuanez H.N., Silva A.M.R., da Silva A.L.C., Silva D.W., Silva R., Simoes I.C., Simon D., Soares C.M.A., Soares R.B.A., Souza E.M., Souza K.R.L., Souza R.C., Steffens M.B.R., Steindel M., Teixeira S.R., Urmenyi T., Vettore A., Wassem R., Zaha A., Simpson A.J.G.
    Proc. Natl. Acad. Sci. U.S.A. 100:11660-11665(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757Imported.

Entry informationi

Entry nameiQ7NUV0_CHRVO
AccessioniPrimary (citable) accession number: Q7NUV0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: March 16, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.