Q7NMF1 (Q7NMF1_GLOVI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Diaminopimelate epimerase HAMAP MF_00197
Short name=DAP epimerase HAMAP MF_00197
EC=5.1.1.7 HAMAP MF_00197

Gene names

Name:	dapF HAMAP MF_00197 EMBL BAC88756.1
Ordered Locus Names:	gll0815

Organism

Gloeobacter violaceus (strain PCC 7421)

Taxonomic identifier

251221 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Gloeobacteria › Gloeobacterales › Gloeobacter

Protein attributes

Sequence length	283 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	LL-2,6-diaminoheptanedioate = meso-diaminoheptanedioate. HAMAP MF_00197 SAAS SAAS018510
Pathway	Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; DL-2,6-diaminopimelate from LL-2,6-diaminopimelate: step 1/1. HAMAP MF_00197 SAAS SAAS018510
Subcellular location	Cytoplasm By similarity HAMAP MF_00197 SAAS SAAS018510.
Sequence similarities	Belongs to the diaminopimelate epimerase family. HAMAP MF_00197

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Lysine biosynthesis HAMAP MF_00197 SAAS SAAS018510
Cellular component	Cytoplasm HAMAP MF_00197 SAAS SAAS018510
Molecular function	Isomerase HAMAP MF_00197 SAAS SAAS018510
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	lysine biosynthetic process via diaminopimelate Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	diaminopimelate epimerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	80	1	By similarity HAMAP MF_00197
	Active site	228	1	By similarity HAMAP MF_00197

Sequences

	Sequence		Length	Mass (Da)
	Q7NMF1 [UniParc]. Last modified December 15, 2003. Version 1. Checksum: A4E22EECB85941FB	FASTA	283	29,997
	10 20 30 40 50 60 MTFAPGTLSF VKYEGLGNDF VLIDNRTAAE PVLSAEEAAA VCDRHFGVGA DGVIFLLSAE 70 80 90 100 110 120 TGADFRMRIY NNDGSEAQMC GNGIRCLAHF ARELGMGGTG SGYRVETGAG LLNIDLLADG 130 140 150 160 170 180 RVRVDMGPPH LLADEIPTTL APADQKAVAA SIPVGGVDWR VTCVNMGNPH AVVFVDELAT 190 200 210 220 230 240 VDLHRFGPLF ERDRHFPERV NTHFAEVISP THLRVKAWER GAGPTLACGT GACAVLVAAV 250 260 270 280 LNGLSHTEAT VELPGGPIEI RWDGATNHLL MTGPARKVFS GLL

References

[1]

"Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids." Nakamura Y., Kaneko T., Sato S., Mimuro M., Miyashita H., Tsuchiya T., Sasamoto S., Watanabe A., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Takeuchi C., Yamada M., Tabata S. DNA Res. 10:137-145(2003) [PubMed: 14621292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PCC 7421.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000045 Genomic DNA. Translation: BAC88756.1.
RefSeq	NP_923761.1. NC_005125.1.
3D structure databases
HSSP	HSSP built from PDB template 1GQZ based on UniProtKB P44859.
ProteinModelPortal	Q7NMF1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2599335.
GenomeReviews	Gene locus gll0815 in contig BA000045_GR.
NMPDR	fig|251221.1.peg.815.
PATRIC	22041023. VBIGloVio86258_0832.
Phylogenomic databases
HOGENOM	HBG399442.
OMA	FMTGPAT.
PhylomeDB	Q7NMF1.
ProtClustDB	PRK00450.
Family and domain databases
HAMAP	MF_00197. DAP_epimerase. [Tree]
InterPro	IPR018510. DAP_epimerase_AS. IPR001653. DAP_epimerase_DapF. [Graphical view]
Pfam	PF01678. DAP_epimerase. 2 hits. [Graphical view]
TIGRFAMs	TIGR00652. DapF. 1 hit.
PROSITE	PS01326. DAP_EPIMERASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q7NMF1_GLOVI

Accession

Primary (citable) accession number: Q7NMF1

Entry history

Integrated into UniProtKB/TrEMBL:	December 15, 2003
Last sequence update:	December 15, 2003
Last modified:	December 14, 2011
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)