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Q7NMD6 (Q7NMD6_GLOVI) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transcription antitermination protein nusG RuleBase RU000538
Gene names
Name:nusG EMBL BAC88771.1
Ordered Locus Names:glr0830
OrganismGloeobacter violaceus (strain PCC 7421)
Taxonomic identifier251221 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Gloeobacteria › Gloeobacterales › Gloeobacter

Protein attributes

Sequence length205 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. RuleBase RU000538 SAAS SAAS006645

Sequence similarities

Belongs to the nusG family. RuleBase RU003559

Sequences

Sequence LengthMass (Da)Tools
Q7NMD6 [UniParc].

Last modified December 15, 2003. Version 1.
Checksum: AEA69D70A1240BFB

FASTA20523,404
        10         20         30         40         50         60 
MVIGTDFLMD SARKPEQPEP HWYFVQVASG CEKKVKTNLE QRIQTMEMSE RILKVEIPER 

        70         80         90        100        110        120 
QAVRIRQEGS RTASAEKIFP GYVLINMVMD DESWQVVKNT PNVINFVGTE ERRRYGRGRG 

       130        140        150        160        170        180 
HVTPRPLGSA EVNRIFRAAE QEEPVIKVDL EPGHKIEVTA GPFQDFNGEV VEVNPERGTL 

       190        200 
KALISIFGRD TPVELGFNQV RRLDE

« Hide

References

[1]"Complete genome structure of Gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids."
Nakamura Y., Kaneko T., Sato S., Mimuro M., Miyashita H., Tsuchiya T., Sasamoto S., Watanabe A., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Takeuchi C., Yamada M., Tabata S.
DNA Res. 10:137-145(2003) [PubMed: 14621292] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 7421.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000045 Genomic DNA. Translation: BAC88771.1.
RefSeqNP_923776.1. NC_005125.1.

3D structure databases

ProteinModelPortalQ7NMD6.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2599350.
GenomeReviewsGene locus glr0830 in contig BA000045_GR.
NMPDRfig|251221.1.peg.830.
PATRIC22041057. VBIGloVio86258_0848.

Phylogenomic databases

HOGENOMHBG751162.
OMAVASGCEK.
PhylomeDBQ7NMD6.
ProtClustDBPRK05609.

Family and domain databases

InterProIPR005824. KOW.
IPR001062. Transcrpt_antiterm_NusG.
IPR015869. Transcrpt_antiterm_NusG_bac_CS.
IPR006645. Transcrpt_antiterm_NusG_N.
IPR014722. Transl_SH3-like_sub.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
Gene3DG3DSA:2.30.30.30. Ribosomal_L2. 1 hit.
G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
PfamPF00467. KOW. 1 hit.
PF02357. NusG. 1 hit.
[Graphical view]
PRINTSPR00338. NUSGTNSCPFCT.
SMARTSM00739. KOW. 1 hit.
SM00738. NGN. 1 hit.
[Graphical view]
SUPFAMSSF82679. Transcrpt_antiterm_NusG_N. 1 hit.
SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMsTIGR00922. NusG. 1 hit.
PROSITEPS01014. NUSG. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ7NMD6_GLOVI
AccessionPrimary (citable) accession number: Q7NMD6
Entry history
Integrated into UniProtKB/TrEMBL: December 15, 2003
Last sequence update: December 15, 2003
Last modified: December 14, 2011
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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