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Protein

UPF0176 protein plu1816

Gene

plu1816

Organism
Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei200 – 2001Cysteine persulfide intermediateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0176 protein plu1816UniRule annotation
Gene namesi
Ordered Locus Names:plu1816
OrganismiPhotorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Taxonomic identifieri243265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePhotorhabdus
Proteomesi
  • UP000002514 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 352352UPF0176 protein plu1816PRO_0000161492Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi243265.plu1816.

Structurei

3D structure databases

ProteinModelPortaliQ7N5W3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini146 – 24095RhodaneseUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the UPF0176 family.UniRule annotation
Contains 1 rhodanese domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C72. Bacteria.
COG1054. LUCA.
HOGENOMiHOG000034809.
KOiK07146.
OMAiCDTHVNC.
OrthoDBiEOG6ND0G7.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR022111. Rhodanese_C.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
PF12368. Rhodanese_C. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q7N5W3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVLHNRISN KELKARMLAE TQPRTTISFY KYFNILNPLD FRNSLYQQFT
60 70 80 90 100
DLSVFGRVYI AKEGINAQIS LPTHNLEAFK ALLYSVDPAL DNLRLNIALD
110 120 130 140 150
DDGKSFWVLR MKVRDRVVAD GIDDETFDPS KTGEYLKAEQ VNQMLDNPDT
160 170 180 190 200
LFVDMRNHYE YEVGHFENAI EVPSDTFREQ LPMVAEMLQD NKDKNIVMYC
210 220 230 240 250
TGGIRCEKAS AYMLHNGFKN VYHVEGGIIE YARKAREQGL PVRFVGKNFV
260 270 280 290 300
FDERMGERIS DDVIAHCHQC GVSCDSHTNC KNEGCHLLFI QCPECATKFE
310 320 330 340 350
GCCSEMCREE VRLPETEQRA RRAGRENGAK IFNKSRHRLQ DGLNSTSLQS

VE
Length:352
Mass (Da):40,418
Last modified:December 15, 2003 - v1
Checksum:iBA431404EE914A13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571865 Genomic DNA. Translation: CAE14109.1.
RefSeqiWP_011146093.1. NC_005126.1.

Genome annotation databases

EnsemblBacteriaiCAE14109; CAE14109; plu1816.
KEGGiplu:plu1816.
PATRICi20507587. VBIPhoLum48522_2038.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571865 Genomic DNA. Translation: CAE14109.1.
RefSeqiWP_011146093.1. NC_005126.1.

3D structure databases

ProteinModelPortaliQ7N5W3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243265.plu1816.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAE14109; CAE14109; plu1816.
KEGGiplu:plu1816.
PATRICi20507587. VBIPhoLum48522_2038.

Phylogenomic databases

eggNOGiENOG4105C72. Bacteria.
COG1054. LUCA.
HOGENOMiHOG000034809.
KOiK07146.
OMAiCDTHVNC.
OrthoDBiEOG6ND0G7.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
HAMAPiMF_00469. UPF0176.
InterProiIPR001763. Rhodanese-like_dom.
IPR022111. Rhodanese_C.
IPR020936. UPF0176.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
PF12368. Rhodanese_C. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 15139 / CIP 105565 / TT01.

Entry informationi

Entry nameiY1816_PHOLL
AccessioniPrimary (citable) accession number: Q7N5W3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: December 15, 2003
Last modified: March 16, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.